| Protein: | CNN2_PONPY |
| Organism: | Pongo pygmaeus |
| Length: | 309 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNN2_PONPY.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..309] | [1..309] |
|
|
0.0 | [1..309] | [1..309] |
|
|
0.0 | [1..309] | [1..309] |
|
|
0.0 | [1..309] | [1..305] |
|
|
0.0 | [4..306] | [2..311] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MSSTQFNKGP SYGLSAEVKN RLLSKYDPQK EAELRTWIEG LTGLSIGPDF QKGLKDGTIL 60
61 CTLMNKLQPG SVPKINRSMQ NWHQLENLSN FIKAMVSYGM NPVDLFEAND LFESGNMTQV 120
121 QVSLLALAGK AKTKGLQSGV DIGVKYSEKQ ERNFDDATM
|
| Detection Method: |  |
| Confidence: | 42.221849 |
| Match: | 1wynA |
| Description: | Solution structure of the CH domain of human calponin-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [160-240] |
1 11 21 31 41 51
| | | | | |
1 KAGQCVIGLQ MGTNKCASQS GMTAYGTRRH LYDPKNHILP PMDHSTISLQ MGTNKCASQV 60
61 GMTAPGTRRH IYDTKLGTDK C
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 1ujyA |
| Description: | Solution structure of SH3 domain in Rac/Cdc42 guanine nucleotide exchange factor(GEF) 6 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 4.94949685871786 | bayes_pls_golite062009 |
| structural constituent of muscle | 4.65743655357495 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 4.41722924924158 | bayes_pls_golite062009 |
| actin filament binding | 3.69427077755816 | bayes_pls_golite062009 |
| binding | 3.06905798270146 | bayes_pls_golite062009 |
| protein binding | 2.08632303609243 | bayes_pls_golite062009 |
| signal transducer activity | 1.34867629228264 | bayes_pls_golite062009 |
| molecular transducer activity | 1.34867629228264 | bayes_pls_golite062009 |
| vinculin binding | 1.06656350652527 | bayes_pls_golite062009 |
| transporter activity | 0.896907103596953 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.713068405985864 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.500685400112742 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.371928447183203 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.272368655500689 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.00318812576030902 | bayes_pls_golite062009 |
|
Region A: Residues: [241-309] |
1 11 21 31 41 51
| | | | | |
1 DNSSMSLQMG YTQGANQSGQ VFGLGRQIYD PKYCPQGTVA DGAPSGTGDC PDPGEVPEYP 60
61 PYYQEEAGY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.290 | 0.004 | cell-cell junction | a.56.1 | CO dehydrogenase ISP C-domain like |
