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View Structure Prediction Details

Protein: gi|50874406
Organism: Vipera aspis zinnikeri
Length: 137 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50874406.

Description E-value Query
Range
Subject
Range
gi|50874436 - gi|50874436|emb|CAE47207.1| ammodytin I2(A) variant [Vipera aspis aspis]
197.0 [0..1] [137..1]
gi|50874502 - gi|50874502|emb|CAE47240.1| ammodytin I2(C) isoform [Vipera ammodytes meridionalis]
196.0 [0..1] [137..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLWIVAVC LIGVEGNLYQ FGNMIFKMTK KSALLSYSNY GCYCGWGGKG KPQDATDRCC  60
   61 FVHDCCYGRV NGCDPKLSIY SYSFENGDIV CGGDDPCLRA VCECDRVAAI CFGENLNTYD 120
  121 KKYKNYPSSH CTETEQC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.0
Match: 1vapA
Description: Snake phospholipase A2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phospholipase A2 activity 5.6430968678228 bayes_pls_golite062009
phospholipase activity 5.38445724291842 bayes_pls_golite062009
calcium-dependent phospholipase A2 activity 4.05813159633475 bayes_pls_golite062009
lipase activity 3.51338748073942 bayes_pls_golite062009
cell surface binding 3.03976629465117 bayes_pls_golite062009
carboxylesterase activity 2.68079964970429 bayes_pls_golite062009
receptor binding 2.23831898285432 bayes_pls_golite062009
binding 1.6033670102211 bayes_pls_golite062009
protein binding 1.47445022237761 bayes_pls_golite062009
hydrolase activity 1.32355620269997 bayes_pls_golite062009
catalytic activity 0.975181414554529 bayes_pls_golite062009
glycosaminoglycan binding 0.453108206649759 bayes_pls_golite062009
heparin binding 0.43572775235244 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.374809125250581 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle