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View Structure Prediction Details

Protein: gi|33866511, gi|...
Organism: Synechococcus sp. WH 8102
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|33866511, gi|....

Description E-value Query
Range
Subject
Range
gi|20905935, gi|... - gi|21227554|ref|NP_633476.1| universal stress protein [Methanosarcina mazei Go1], gi|20905935|gb|AAM...
197.0 [0..3] [278..11]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKKLLIADS GKGHVEEMIR MLQDIPSMRS AAMALLHVIP EQSKAGADSH RIDAEELLDS  60
   61 AINRMGLERS RVTPLVREGD TKQTVLKVAE EQNCDLIVMG SRGLGRLQSI LANSASQYVF 120
  121 QLSTRPMLLV RDDLYVRHVN RVMVTI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.522879
Match: 1mjhA
Description: "Hypothetical" protein MJ0577
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.298809327772818 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [147-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGTGVGDDAL RSACELVQQI PGGTLTGVHV ISQETAPSRG GLSKADELLQ AAAQRARSFG  60
   61 VELKCLTVQG KDIGRAVCQA AEQANADLLV IASQDRRPLV ARGLVDLDKL LGGSVSDYIR 120
  121 VHAPAPVLLV REPERG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.93
Match: 1wjgA
Description: Crystal structure of a probable ATP binding protein from thermus themophilus HB8
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.257625842690978 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle