YRC Public Data Repository - Protein Structure Prediction

Protein:	PFDB_SULSO
Organism:	Sulfolobus solfataricus P2
Length:	126 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PFDB_SULSO.

Description	E-value	Query Range	Subject Range
Eps-15-PB - The gene Epidermal growth factor receptor pathway substrate clone 15 is referred to in FlyBase by th...	96.0	[0..3]	[121..446]
gi\|116117781, gi... - gi\|118791811\|ref\|XP_319960.3\| ENSANGP00000016740 [Anopheles gambiae str. PEST], gi\|116117781\|gb\|EAA1...	96.0	[0..3]	[121..430]
gi\|50761168 - gi\|50761168\|ref\|XP_418263.1\| PREDICTED: similar to epidermal growth factor receptor pathway substrat...	95.0	[0..4]	[123..404]
gi\|89348180 - gi\|89348180\|gb\|ABD72216.1\| CTTNBP2 [Homo sapiens]	94.0	[0..1]	[122..125]
gi\|49119498 - gi\|49119498\|gb\|AAH73619.1\| Eps15R protein [Xenopus laevis]	94.0	[0..4]	[123..408]

Back

Predicted Domain #1

Region A:
Residues: [1-126]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKLPPEVQ AQLAKFQQLK DQLDRLLLEK STIENELREI NKVLEELSVL NADATIYKIV  60
   61 GNLLVKSDKT SVEKELNDRK ELLELRSRTY QKQESILRKQ LEDLQAKIND MLSKYYPQGG 120
  121 QTGIKA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	5.0
Match:	1fxkB
Description:	Prefoldin beta subunit
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits