| Protein: | SSB_NITEU |
| Organism: | Nitrosomonas europaea ATCC 19718 |
| Length: | 149 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SSB_NITEU.
| Description | E-value | Query Range |
Subject Range |
|
|
204.0 | [0..1] | [149..1] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MASLNKVMLI GNLGRDPEIR YMPSGDAMAN LNIATTDTWK DKGGEKQERT EWHRVVMFGK 60
61 QAEIAGEYLK KGSQIYIEGR LQTRKWTDKS NVERYTTEIV ADRMQMLGGR SGGGSYDPPA 120
121 DRDHDYQSQS TPPAKSNTGF DDMEDDIPF
|
| Detection Method: |  |
| Confidence: | 49.522879 |
| Match: | 1eqqA |
| Description: | SINGLE STRANDED DNA BINDING PROTEIN AND SSDNA COMPLEX |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 2.26271782657431 | bayes_pls_golite062009 |
| binding | 2.01819468874386 | bayes_pls_golite062009 |
| DNA binding | 1.81052012500635 | bayes_pls_golite062009 |
| single-stranded DNA binding | 1.38758756313423 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.30327082958682 | bayes_pls_golite062009 |
| transcription regulator activity | 0.537716356194117 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0989196136046104 | bayes_pls_golite062009 |
