YRC Public Data Repository - Protein Structure Prediction

Protein:	DGK1_LACJO
Organism:	Lactobacillus johnsonii NCC 533
Length:	215 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DGK1_LACJO.

Description	E-value	Query Range	Subject Range
gi\|52857777 - gi\|52857777\|ref\|ZP_00047469.2\| hypothetical protein Lgas_03001856 [Lactobacillus gasseri ATCC 33323] gi\|238852757, gi... - gi\|238852757\|ref\|ZP_04643163.1\| deoxyadenosIne kinase [Lactobacillus gasseri 202-4], gi\|238834607\|gb... gi\|52857777 - gi\|52857777\|ref\|ZP_00047469.2\| COG1428: Deoxynucleoside kinases [Lactobacillus gasseri]	180.0	[0..1]	[215..1]
gi\|1361410, gi\|4... - gi\|403984\|gb\|AAB09751.1\| deoxyguanosine kinase/deoxyadenosine kinase(I) subunit, sp\|Q59484\|DGK2_LACA...	179.0	[0..1]	[214..1]
DGK2_LACJO - Deoxyguanosine kinase OS=Lactobacillus johnsonii GN=LJ_1825 PE=1 SV=3 DGK2_LACJO - Deoxyguanosine kinase OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) GN=LJ_1825 PE...	178.0	[0..1]	[214..1]
gi\|227902623, gi... - gi\|227902623\|ref\|ZP_04020428.1\| deoxyadenosine kinase [Lactobacillus acidophilus ATCC 4796], gi\|2278... DGK1_LACAC - Deoxyadenosine kinase OS=Lactobacillus acidophilus GN=LBA1949 PE=3 SV=2 DGK1_LACAC - Deoxyadenosine kinase OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) GN=LBA19...	174.0	[0..3]	[214..4]
gi\|77175746, gi\|... - gi\|77405673\|ref\|ZP_00782761.1\| deoxynucleoside kinase family protein [Streptococcus agalactiae H36B]... gi\|76787409, gi\|... - gi\|76787409\|ref\|YP_330443.1\| deoxynucleoside kinase family protein [Streptococcus agalactiae A909], ...	170.0	[0..2]	[214..1]
gi\|77162417, gi\|... - gi\|77411563\|ref\|ZP_00787906.1\| deoxynucleoside kinase family protein [Streptococcus agalactiae CJB11...	170.0	[0..2]	[214..1]

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Predicted Domain #1

Region A:
Residues: [1-215]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVIVLSGPI GAGKSSLTSL LAEHLGTQAF YEGVDNNPIL PLYYKDMAHY TFLLNTYLLN  60
   61 HRLAQINQAI RDHNSVSDRS IYEDALFFKM NVDSGIADPT EFKIYDSLLE NMMEQAPGNP 120
  121 SKKPDLLIYI HVSLDTMLHR IQKRGRKFEQ LSTDPSLKDY YARLLSYYEP WYEKYNASPK 180
  181 MMIDGDKYDF VANEDARRKV INAIDQKLID IGNLN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.39794
Match:	2jasA
Description:	No description for 2jasA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits