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View Structure Prediction Details

Protein: gi|98960985, gi|...
Organism: Arabidopsis thaliana
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|98960985, gi|....

Description E-value Query
Range
Subject
Range
BZP10_ARATH - Basic leucine zipper 10 OS=Arabidopsis thaliana GN=BZIP10 PE=1 SV=2
220.0 [0..1] [417..1]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSIFSIDDF SDPFWETPPI PLNPDSSKPV TADEVSQSQP EWTFEMFLEE ISSSAVSSEP  60
   61 LGNNNNAIVG VSSAQSLPSV SGQNDFEDDS RFRDRDSGNL DCAAPMTTKT VIVDSDDYRR 120
  121 VLKNKLETEC ATVVSLRVGS VKPEDSTSSP ETQLQPVQSS PLTQGSLMTP GELGVTSSLP 180
  181 AEVKKTGVSM KQVTSGSSRE YS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [203-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDEDLDEENE TTGSLKPEDV KKSRRMLSNR ESARRSRRRK QEQTSDLETQ VNDLKGEHSS  60
   61 LLKQLSNMNH KYDEAAVGNR ILKADIETLR AKVKMAEETV KRVTGMNPML LGRSSGHNNN 120
  121 NRMPITGNNR MDSSSIIPAY QPHSNLNHMS NQNIGIPTIL PPRLGNNFAA PPSQTSSPLQ 180
  181 RIRNGQNHHV TPSANPYGWN TEPQNDSAWP KKCVD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle