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View Structure Prediction Details

Protein: NDUB7_BOVIN
Organism: Bos taurus
Length: 137 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDUB7_BOVIN.

Description E-value Query
Range
Subject
Range
NDUFB7 - NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa
gi|123981992, gi... - gi|123996819|gb|ABM86011.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa [synthetic c...
215.0 [0..1] [137..1]
gi|109123688 - gi|109123688|ref|XP_001111436.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 beta subcom...
214.0 [0..1] [137..1]
NDUB7_PONPY - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus GN=NDUFB7 PE=2 SV=3
gi|111662058 - gi|111662058|gb|ABH12200.1| mitochondrial complex I subunit NDUFB7 [Gorilla gorilla]
NDUB7_GORGO - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla gorilla GN=NDUFB7 PE=...
NDUB7_PONAB - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo abelii GN=NDUFB7 PE=2 SV=3
gi|55648479 - gi|55648479|ref|XP_524135.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 beta subcomplex...
214.0 [0..1] [137..1]
NDUB7_MOUSE - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Mus musculus GN=Ndufb7 PE=1 SV=3
213.0 [0..1] [137..1]
NDUB7_PANTR - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes GN=NDUFB7 PE=2 SV=3
212.0 [0..1] [137..1]
gi|73986646 - gi|73986646|ref|XP_533892.2| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 beta subcomplex...
207.0 [0..1] [137..1]
gi|157823197, gi... - gi|34851467|ref|XP_341665.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 beta subcomplex...
201.0 [0..1] [137..1]
gi|47223896 - gi|47223896|emb|CAG06073.1| unnamed protein product [Tetraodon nigroviridis]
184.0 [0..1] [119..1]
gi|38328313, gi|... - gi|41053587|ref|NP_957142.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa [Danio reri...
184.0 [0..1] [120..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAHLARRYL GDASVEPDPL RMPTFPPDYG FPERKEREMV ATQQEMNDAQ LVLQQRDYCA  60
   61 HYLIRFLKCK RDSFPNFLAC KHERHDWDYC EHLDYVKRMK EFERERRLLQ RKKRREQREA 120
  121 DMAKGLGPGE VAPEVAL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 80.366532
Match: PF05676.4
Description: No description for PF05676.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
NADH dehydrogenase activity 4.0159200956741 bayes_pls_golite062009
NADH dehydrogenase (ubiquinone) activity 3.34379510439824 bayes_pls_golite062009
NADH dehydrogenase (quinone) activity 2.90265540282238 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 2.80606827553642 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor 2.57207870585491 bayes_pls_golite062009
binding 1.48228105994671 bayes_pls_golite062009
kinase activity 0.67639546533959 bayes_pls_golite062009
protein binding 0.627593041202079 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.609967396037548 bayes_pls_golite062009
protein kinase activity 0.515035144582106 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.51248125311192 bayes_pls_golite062009
protein serine/threonine kinase activity 0.282410009383301 bayes_pls_golite062009
catalytic activity 0.200692691855311 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle