YRC Public Data Repository - Protein Structure Prediction

Protein:	ECHS1
Organism:	Homo sapiens
Length:	290 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECHS1.

Description	E-value	Query Range	Subject Range
gi\|60655953, gi\|... - gi\|60655955\|gb\|AAX32541.1\| mitochondrial enoyl coenzyme A hydratase short chain 1 [synthetic constru... gi\|30583085, gi\|... - gi\|30583085\|gb\|AAP35787.1\| enoyl Coenzyme A hydratase, short chain, 1, mitochondrial [Homo sapiens],...	3.0E-84	[1..290]	[1..290]
gi\|60652867, gi\|... - gi\|60652867\|gb\|AAX29128.1\| enoyl coenzyme A hydratase short chain 1 mitochondrial [synthetic constru...	3.0E-84	[1..290]	[1..290]
ECHM_PONPY - Enoyl-CoA hydratase, mitochondrial precursor - Pongo pygmaeus (Orangutan) ECHM_PONAB - Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2 SV=1	5.0E-83	[1..290]	[1..290]
ECHM_MOUSE - Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1 SV=1	1.0E-81	[1..289]	[1..289]
ECHM_RAT - Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1 PE=1 SV=1	6.0E-81	[1..289]	[1..289]
gi\|20807045, gi\|... - gi\|20807045\|ref\|NP_622216.1\| 3-hydroxybutyryl-CoA dehydratase [Thermoanaerobacter tengcongensis MB4]... gi\|20807045 - gi\|20807045\|ref\|NP_622216.1\| enoyl-CoA hydratase [Thermoanaerobacter tengcongensis MB4]	3.0E-78	[31..290]	[1..260]

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Predicted Domain #1

Region A:
Residues: [1-290]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALRVLLSC VRGPLRPPVR CPAWRPFASG ANFEYIIAEK RGKNNTVGLI QLNRPKALNA  60
   61 LCDGLIDELN QALKTFEEDP AVGAIVLTGG DKAFAAGADI KEMQNLSFQD CYSSKFLKHW 120
  121 DHLTQVKKPV IAAVNGYAFG GGCELAMMCD IIYAGEKAQF AQPEILIGTI PGAGGTQRLT 180
  181 RAVGKSLAME MVLTGDRISA QDAKQAGLVS KICPVETLVE EAIQCAEKIA SNSKIVVAMA 240
  241 KESVNAAFEM TLTEGSKLEK KLFYSTFATD DRKEGMTAFV EKRKANFKDQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	78.0
Match:	2hw5A
Description:	No description for 2hw5A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits