| Protein: | sra-35 |
| Organism: | Caenorhabditis elegans |
| Length: | 339 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-35.
| Description | E-value | Query Range |
Subject Range |
|
|
197.0 | [0..3] | [326..357] |
|
Region A: Residues: [1-339] |
1 11 21 31 41 51
| | | | | |
1 MNNSTETLLA ARTSLLYRGN ALFQISICIL TLYFSGKAFK VLYRRSVFHI STHQLLFMSI 60
61 VYADFHAISY GFLQAISLYR SVVFYDDPVM IMFTGYECYA ITWTVGAAKM LMSFIQTALT 120
121 IERIIDRIIP LVPKLKPFKR QGLFLNAFAL TAGISTTIYS YSEGPTGYKL ASCFMQKDIP 180
181 LDRVLYTLGM YFALSLLCLL ANLTIIFSIF KSSKKSFNLK IRFNFQEVKN SSFAVSLISV 240
241 FQFVAMTAYV ASSLIVIYYR RDIPHEYFHN IILCIYTIPY GGLCLPLSVI YCTKWISDHR 300
301 KIQIVQMTNT NRTETMDGRM SQLKNAWDSL APSTPTKKY
|
| Detection Method: |  |
| Confidence: | 44.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
