| Protein: | elt-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 488 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for elt-1.
| Description | E-value | Query Range |
Subject Range |
|
|
221.0 | [0..1] | [462..1397] |
|
Region A: Residues: [1-168] |
1 11 21 31 41 51
| | | | | |
1 MHYRDANYSI SRNKVNLHHE EFMLDGVVGG EDHDMQNTNE VRAELDSLLR LDPDTNSIID 60
61 ALHISQPIEQ ENMDYEGKPV EFTLGTSSGG ASLAPTSSTT AASIAPFSYN TSATNYYNTT 120
121 PSSYPMFLNY QYAGGTTVTT DMDAFSGMDM SMNNGVFGTQ NNPSYFYP
|
| Detection Method: |  |
| Confidence: | 19.221849 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [169-262] |
1 11 21 31 41 51
| | | | | |
1 TTQLNTYGYD TLAAATTASG ITVNNNQLNV NIVQGNGTIV PQPITQNIIS TVSNVQSSVP 60
61 INNSQPLTPT GLAGCSTSSG SSSASSSSAN STST
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [263-339] |
1 11 21 31 41 51
| | | | | |
1 PKNTISKANR SSGGANNSQF STEDRECVNC GVHNTPLWRR DGSGNYLCNA CGLYFKMNHH 60
61 ARPLVKPKKR QQNAQKR
|
| Detection Method: | |
| Confidence: | 2.94 |
| Match: | 2gatA |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.09202730533215 | bayes_pls_golite062009 |
| protein binding | 0.607672767407822 | bayes_pls_golite062009 |
|
Region A: Residues: [340-389] |
1 11 21 31 41 51
| | | | | |
1 TGIECVNCRT NTTTLWRRNG EGHPVCNACG LYFKLHKVER PITMKKDGIQ
|
| Detection Method: | |
| Confidence: | 12.221849 |
| Match: | 2gatA |
| Description: | Erythroid transcription factor GATA-1 |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.18770607371139 | bayes_pls_golite062009 |
| protein binding | 0.699012253331291 | bayes_pls_golite062009 |
| transcription regulator activity | 0.1367607837242 | bayes_pls_golite062009 |
|
Region A: Residues: [390-488] |
1 11 21 31 41 51
| | | | | |
1 TRNRKLSAKG SRRMKKENGG TPTSMGMPTT SSSISSGIEL DQSGVWGMKN TQPMLMTPTA 60
61 YAFPASNFYF NSIEDQLEYK TCPPMMVDFG GQMKNLNLN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
