| Protein: | nas-36 |
| Organism: | Caenorhabditis elegans |
| Length: | 617 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-36.
| Description | E-value | Query Range |
Subject Range |
|
|
336.0 | [0..1] | [617..1] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MRLCHSIILF NSLISISICS KADDPALLVA SEFKEHFNVE EKQLETVEEL LIKMKKLAHS 60
61 RSFKGREFGH DAVE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [75-324] |
1 11 21 31 41 51
| | | | | |
1 DSKKEVAIST QQGTINKKVS PFLFEGDIFL SRRQAVDILK ALSKDKTKRL RRSFVSDKTA 60
61 TWKTMPIKYR FHESIDFYTI SQIIAAIRFW EDSTCITFEN VSDSPDGDYI EFFSGQGCYS 120
121 MIGRNGGRQG ISIGESCVKM GVIEHEIGHA LGLWHEQSRP DALGYVTIER DFILPSYISD 180
181 FLQRDDEIDT LGIPYDLGSV MHYGSTAFSV DQKSKTVVTR DSLYQQTIGQ REKLSFYDVA 240
241 TINTAYCKDE
|
| Detection Method: | |
| Confidence: | 41.0 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 3.87713655504947 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.50720289959102 | bayes_pls_golite062009 |
| metallopeptidase activity | 2.55317823694462 | bayes_pls_golite062009 |
| endopeptidase activity | 2.52973705827479 | bayes_pls_golite062009 |
| hydrolase activity | 2.30803642767787 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 1.81132179546381 | bayes_pls_golite062009 |
| catalytic activity | 1.26162753036584 | bayes_pls_golite062009 |
| exopeptidase activity | 0.71491631246151 | bayes_pls_golite062009 |
| binding | 0.210557818016724 | bayes_pls_golite062009 |
|
Region A: Residues: [325-617] |
1 11 21 31 41 51
| | | | | |
1 CKSEKTKCEN GGYMRPSKCS ECLCPDGLGG EKCEKNEDSK NAECGGIIKL TEEWKEIESP 60
61 NYPDPGYEAD QKCSWLLKAE KGKRVEIEFI EDFSFLCTST CVDFVELKIS DDLRNTGFRF 120
121 CCYDKPEISF VSQTDTAIII FRSQLSTDIG FKIQAKSTDA EPRTTIAPTI ITTTLAPITV 180
181 DAPNVWADWG EWSMCSRTCG GCGIRSRVRS CRSKKCEGRR QEFGTCNLKA CPVDKHCAKL 240
241 LSNNRLCNGK VCTKNDIAIS SCDAPQCCPP FINVDGVCQS DQENQHDELW LSI
|
| Detection Method: | |
| Confidence: | 10.09691 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
