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View Structure Prediction Details

Protein: kri-1
Organism: Caenorhabditis elegans
Length: 656 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kri-1.

Description E-value Query
Range
Subject
Range
gi|115961306 - gi|115961306|ref|XP_001191069.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
644.0 [0..4] [655..251]

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Predicted Domain #1
Region A:
Residues: [1-501]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVSVAIVR LKISALSDKA IPSAQDFEIC VKEEPSTAKN FGPVKHDYNI KKRVTVGGHT  60
   61 IGADVFKLPN FSFEPSKVST LEDMIHDYFK RTGNIIRRSV RIPLHDDLHQ PSSSTKPFVG 120
  121 HVPGLSLVCV PVFNKESVEV ANSRYENLQK MVNLCHNQPE MFDIHTKNMI LILERWLIDS 180
  181 QTFDSYFLSH FFMKESSRTR IKTCVHNPAF IDLQEQCIRH MSHSVRSNVS SASADLDDRV 240
  241 HVANIAKIAM LRYNKFTISV INPAFNPNFA SEDSSCVYFY PGIKQCRAQR AASSTSQDMR 300
  301 SRLYPLHKAA EDGNAEEIRR FLKIGMDSNL RDDDSWTPLH YACFHGHLEV VHELLNSPQM 360
  361 TAINAQNKGG ATALQYAVIN GNEYLVEILT SHASIDVNIQ NNEGYRPIDY CGNHPAIQKI 420
  421 LELQIFKSKI NVDTSIGSFS IKSRSPEEAT VGEVLDRLAE ETQLNREQMN CFALFVYSES 480
  481 MSLQLQPDSL IDGKLKVDKW N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.154902
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [502-550]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTIRKLVGDI PFETPRLKLK RNAYATARME IVTKVDNNSF AWSTILDEA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.69897
Match: 1wdyA
Description: Crystal structure of ribonuclease
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [551-656]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IHSYLAGHLI ANSKEEITKF AAIVCRTMHG RDFKPSSKNL SNLYPQYMLD NHDRGKLADR  60
   61 LKAQLRKNET QNDMQLEAEF ISMARGLVTY GASFFDVDVF TKKVRK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.5
Match: 2al6A
Description: FERM domain of Focal Adhesion Kinase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle