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View Structure Prediction Details

Protein: ATPG_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATPG_PHOLL.

Description E-value Query
Range		 Subject
Range
gi|148138 - gi|148138|gb|AAA24736.1| ATP synthase gamma subunit [Escherichia coli]
 390.0 [0..1] [287..1]

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Predicted Domain #1
Region A:
Residues: [1-287] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGAKEIRTK IASVQNTQKI TKAMEMVAAS KMRKTQDRMA ASRPYAETIR SVIGHLALGN  60
   61 LEYKHPYLEE RETKRVGYLV VSTDRGLCGG LNTNLFKKLL SEMKDWSDKD VQCELALIGS 120
  121 KATSFFASVG GNVVAQVTGM GDNPSLSELI GPVNIMLRAY DEGRLDKLYV VTNKFINTMS 180
  181 QEPTITQLLP LPAGDDETLK KKSWDYLYEP DPKALLDILL RRYVESQVYQ GVVENLASEQ 240
  241 AARMVAMKAA TDNGGSLIKE LQLVYNKARQ ASITQELTEI VSGASAV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.045757
Match: 1fs0G
Description: ATP synthase (F1-ATPase), gamma subunit
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrogen ion transporting ATP synthase activity, rotational mechanism 15.1137831131288 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 13.4145652211868 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 11.6641947022993 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 10.5487930833633 bayes_pls_golite062009
cation transmembrane transporter activity 6.80604482262055 bayes_pls_golite062009
ion transmembrane transporter activity 6.69705984340533 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 6.26502594800359 bayes_pls_golite062009
proton-transporting ATPase activity, rotational mechanism 5.63110240369142 bayes_pls_golite062009
transporter activity 4.45226670606147 bayes_pls_golite062009
hydrogen-exporting ATPase activity, phosphorylative mechanism 4.41868118040901 bayes_pls_golite062009
substrate-specific transporter activity 4.39356148903647 bayes_pls_golite062009
transmembrane transporter activity 4.37099130240158 bayes_pls_golite062009
cation-transporting ATPase activity 3.59230188331019 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 1.90203817584499 bayes_pls_golite062009
binding 1.15817227356277 bayes_pls_golite062009
nucleoside-triphosphatase activity 1.06444952929525 bayes_pls_golite062009
pyrophosphatase activity 0.999037106125156 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.982260922227037 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.979897673854905 bayes_pls_golite062009
ATPase activity 0.97716527277771 bayes_pls_golite062009
primary active transmembrane transporter activity 0.832120661263195 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 0.826276552217418 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 0.799415003044834 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 0.796014711689645 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 0.795885962810984 bayes_pls_golite062009
active transmembrane transporter activity 0.786890420776467 bayes_pls_golite062009
protein binding 0.556386379655548 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism 0.549067982072581 bayes_pls_golite062009
ATPase activity, coupled 0.330850590075407 bayes_pls_golite062009
hydrolase activity 0.136524426848017 bayes_pls_golite062009
catalytic activity 0.0130900138976991 bayes_pls_golite062009
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