YRC Public Data Repository - Protein Structure Prediction

Protein:	Y721_ACIAD
Organism:	Acinetobacter sp. ADP1
Length:	111 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y721_ACIAD.

Description	E-value	Query Range	Subject Range
gi\|49529919, gi\|... - gi\|50083943\|ref\|YP_045453.1\| hypothetical protein ACIAD0721 [Acinetobacter sp. ADP1], gi\|49529919\|em...	162.0	[0..1]	[111..2]
gi\|82703287, gi\|... - gi\|82703287\|ref\|YP_412853.1\| hypothetical protein Nmul_A2168 [Nitrosospira multiformis ATCC 25196], ...	157.0	[0..1]	[110..1]
gi\|85710852, gi\|... - gi\|85710852\|ref\|ZP_01041913.1\| hypothetical protein OS145_02455 [Idiomarina baltica OS145], gi\|85695...	156.0	[0..1]	[111..1]
gi\|49176186, gi\|... - gi\|49176186\|ref\|NP_416584.3\| hypothetical protein b2080 [Escherichia coli K12], gb\|AAC75141.1\| orf, ... gi\|7466285 - gi\|7466285\|pir\|\|G64974 hypothetical protein b2080 - Escherichia coli (strain K-12)	153.0	[0..1]	[110..14]
gi\|21958152, gi\|... - gi\|22125279\|ref\|NP_668702.1\| hypothetical protein y1380 [Yersinia pestis KIM], gi\|21958152\|gb\|AAM849... gi\|45442493, gi\|... - gi\|45442493\|ref\|NP_994032.1\| hypothetical protein YP_2720 [Yersinia pestis biovar Microtus str. 9100...	153.0	[0..1]	[110..16]
gi\|74312605, gi\|... - gi\|74312605\|ref\|YP_311024.1\| hypothetical protein SSON_2133 [Shigella sonnei Ss046], gi\|73856082\|gb\|... gi\|82543454, gi\|... - gi\|82543454\|ref\|YP_407401.1\| hypothetical protein SBO_0906 [Shigella boydii Sb227], gi\|81244865\|gb\|A...	153.0	[0..1]	[110..14]
gi\|91072942, gi\|... - gi\|91211368\|ref\|YP_541354.1\| hypothetical protein UTI89_C2355 [Escherichia coli UTI89], gi\|91072942\|... gi\|237704537, gi... - gi\|237704537\|ref\|ZP_04535018.1\| conserved hypothetical protein [Escherichia sp. 3_2_53FAA], gi\|22690... gi\|117624276, gi... - gi\|117624276\|ref\|YP_853189.1\| hypothetical protein APECO1_1170 [Escherichia coli APEC O1], gi\|115513... gi\|26108859, gi\|... - gi\|26248454\|ref\|NP_754494.1\| hypothetical protein c2606 [Escherichia coli CFT073], gi\|26108859\|gb\|AA...	153.0	[0..1]	[110..14]
gi\|30063525, gi\|... - gi\|30063525\|ref\|NP_837696.1\| hypothetical protein S2270 [Shigella flexneri 2a str. 2457T], gi\|300417... gi\|110806050, gi... - gi\|110806050\|ref\|YP_689570.1\| hypothetical protein SFV_2141 [Shigella flexneri 5 str. 8401], gi\|1106... gi\|24113462, gi\|... - gi\|24113462\|ref\|NP_707972.1\| hypothetical protein SF2145 [Shigella flexneri 2a str. 301], gi\|2405249...	153.0	[0..1]	[110..14]
YEGP_PSEST - (O69049) Hypothetical 12.7 kDa protein in ptx operon 5'region (ORF117)	153.0	[0..1]	[109..6]
gi\|78506169, gi\|... - gi\|78686033\|ref\|ZP_00850805.1\| conserved hypothetical protein [Shewanella sp. ANA-3], gi\|78506169\|gb... gi\|113886238, gi... - gi\|82497774\|ref\|ZP_00883301.1\| conserved hypothetical protein [Shewanella sp. MR-4], gi\|82404218\|gb\|... Y3888_SHEON - UPF0339 protein SO_3888 OS=Shewanella oneidensis (strain MR-1) GN=SO_3888 PE=1 SV=1 SO3888 - conserved hypothetical protein	152.0	[0..1]	[110..1]

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Predicted Domain #1

Region A:
Residues: [1-111]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGWYEISQA KDGQYRFVLK AGNGEIILTS ELYKAKASAE NGIASVQKNS SDDARYERLV  60
   61 AKNDKPYFNL KAANHQVIGT SQFYASEQSR DKGIESVKNN GTTATVKDLT G

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits