| Protein: | gi|78070714, gi|... |
| Organism: | Homo sapiens |
| Length: | 214 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|78070714, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-72 | [1..214] | [382..595] |
|
|
1.0E-71 | [1..214] | [1..214] |
|
|
8.0E-70 | [1..214] | [336..548] |
|
|
4.0E-69 | [1..214] | [369..581] |
|
|
2.0E-66 | [1..214] | [365..570] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MGEEVIPLRV LSKSEWMDLK KEYLALQKAS MASLKKTISQ IKSESEMETD SGVPQNTGMK 60
61 NEKTANREEC RTQEKVNAT
|
| Detection Method: |  |
| Confidence: | 5.522879 |
| Match: | 1zh5A |
| Description: | Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [80-214] |
1 11 21 31 41 51
| | | | | |
1 GPQFVSGVIV KIISTEPLPG RKQVRDTLAA ISEVLYVDLL EGDTECHARF KTPEDAQAVI 60
61 NAYTEINKKH CWKLEILSGD HEQRYWQKIL VDRQAKLNQP REKKRGTEKL ITKAEKIRLA 120
121 KTQQASKHIR FSEYD
|
| Detection Method: | |
| Confidence: | 28.522879 |
| Match: | 1owxA |
| Description: | Lupus LA protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
