YRC Public Data Repository - Protein Structure Prediction

Protein:	FABZ_PSEP1
Organism:	Pseudomonas putida F1
Length:	146 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FABZ_PSEP1.

Description	E-value	Query Range	Subject Range
gi\|213969129, gi... - gi\|213969129\|ref\|ZP_03397268.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Pseudomona... FABZ_PSESM - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. tomato (strain DC3... FABZ_PSESM - (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas syringae pv. tomato GN=fabZ ...	200.0	[0..1]	[146..1]
FABZ_PSEU2 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. syringae (strain B... FABZ_PSE14 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas savastanoi pv. phaseolicola (st... tr\|F3G1L3\|F3G1L3... - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. pisi str. 1704B GN... gi\|237800154 - gi\|237800154\|ref\|ZP_04588615.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Pseudomonas syringae pv. oryz...	199.0	[0..1]	[146..1]
gi\|49075978 - gi\|49075978\|gb\|AAT49514.1\| PA3645 [synthetic construct]	198.0	[0..1]	[146..1]
gi\|84319625, gi\|... - gi\|84319625\|ref\|ZP_00968019.1\| COG0764: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) ... FABZ_PSEAE - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas aeruginosa (strain ATCC 15692 /... gi\|126195721, gi... - gi\|84325651\|ref\|ZP_00973685.1\| COG0764: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) ... FABZ_PSEA7 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas aeruginosa (strain PA7) GN=fabZ... gi\|107103159 - gi\|107103159\|ref\|ZP_01367077.1\| hypothetical protein PaerPA_01004228 [Pseudomonas aeruginosa PACS2] FABZ_PSEAE - (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas aeruginosa GN=fabZ PE=1 SV=1 FABZ_PSEA8 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas aeruginosa (strain LESB58) GN=f... FABZ_PSEAB - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas aeruginosa (strain UCBPP-PA14) ...	198.0	[0..1]	[146..1]
FABZ_PSEPF - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas fluorescens (strain Pf0-1) GN=f...	198.0	[0..1]	[146..1]
FABZ_PSEE4 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas entomophila (strain L48) GN=fab... gi\|95112171 - gi\|95112171\|emb\|CAK16898.1\| (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase [Pseudomonas en...	197.0	[0..1]	[146..1]
gi\|24983083, gi\|... - gi\|26988334\|ref\|NP_743759.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Pseudomonas putida KT2440], gi\|2...	197.0	[0..1]	[146..18]
FABZ_PSEF5 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas fluorescens (strain Pf-5 / ATCC...	196.0	[0..1]	[146..1]
gi\|91795797, gi\|... - gi\|92112707\|ref\|YP_572635.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Chromohalobacter salexigens DSM ...	193.0	[0..1]	[146..2]
gi\|55670133, gi\|... - gi\|55670136\|pdb\|1U1Z\|F Chain F, The Structure Of (3r)-Hydroxyacyl-Acp Dehydratase (Fabz), gi\|5567013...	192.0	[0..3]	[146..23]

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Predicted Domain #1

Region A:
Residues: [1-146]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDINEIREY LPHRYPFLLV DRVTDLDFEA QSIRAYKNVS INEPFFNGHF PAHPIMPGVL  60
   61 IIEAMAQAAG ILGFKMLDAK PADGTLYYFV GSDKLRFRQP VLPGDQLVLE AKFLSRKSMI 120
  121 WKFECRALVD GKPVCSAEIT CAERSL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	51.522879
Match:	1u1zA
Description:	The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits