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View Structure Prediction Details

Protein: pes-22
Organism: Caenorhabditis elegans
Length: 710 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pes-22.

Description E-value Query
Range
Subject
Range
pes-22 - status:Partially_confirmed UniProt:Q2L6X8 protein_id:ABC71825.1
396.0 [0..1] [696..1]

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Predicted Domain #1
Region A:
Residues: [1-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDGPDPNRS SQPTSPTKSL KSERNGESNF EEDDQDIGSL NDGQLTNYSS QYSINMGVQQ  60
   61 VEPLLVPQAP DGGYGWVIVF AAFMSNLVVD GISTAFSEFK QSYKERYQES DGLTVFIGSL 120
  121 IIGTYLLVGP LVSALCNKYE QRYVVMAGGL ISGIAFMIAP ASPNIYVFML IYGVMGGLGF 180
  181 GMIYLPAIVV VGFYFDSKRA MATGISVAGS GVGTFLVPLI CQVCIANLGW QKTIWVLAVM 240
  241 IFSCVFYGYL YRPLPMVDLN EIRDQEMEPL RQALSKVEDD EDEAVESPHP NRSTSAASGA 300
  301 IEDEAVSQNP EVQRLRSILT EGDEGSETPK SDAHKVRSHT ATRSRKHTMT SNSGSQHDLK 360
  361 LSRGNLSSDN RLSRVSARDF NQSLSKLSKS GGASNLSIAM SGVDPKEFQR PMNRQDIFYG 420
  421 GSIQNLKEFK EEGTMAGYRA STLSIPRSVV GQAVSQLNLS RTGSRLGGPG IAEDEEEMIE 480
  481 PFVDDGCCKV LPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.154902
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.118997796261274 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [494-710]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PMRNALSEMI DLNLLKNKTM MILCISNLLG MMGFYIPIMF LKDLSESMKL DMSLAMFLVP  60
   61 IFGVFNTIGR VFFGWLTDQK ILSALTINNL SLIVSGLLTL ACPLLTSIAG QYFYAIVFGF 120
  121 IISAYICLTS IVLADLMGLE NLTNSFGLLV VARGIASLVG PPFAGIVYDI TGSYDTAFYF 180
  181 GGLVLLVAGL ISATIPFVTK KDADTAGVYK IAKTRYI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 1pv6A
Description: Crystal structure of lactose permease
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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