| Protein: | SIFR-PB |
| Organism: | Drosophila melanogaster |
| Length: | 523 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SIFR-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
398.0 | [0..1] | [520..1] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MMAASGRIRK RKHKSHTSGD VPSTTTSVPM PIPTMAPGKM VAETMEEAAA LAGDYNNFTH 60
61 NFVDLQNLLS FNELNGTSGS GGTAVSSLGS SSAIKLNNSA ITDTLLGTVL TTATATVAPA 120
121 ASSLLATLAA TTTASARGSL AGKSLAIADA TSSTYYSNLL NLSPATTSLI SAAAATKSYN 180
181 DSA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [184-523] |
1 11 21 31 41 51
| | | | | |
1 LRWEQLDGSV DFGFDPLYRH SLAMSMVYCV AYIVVFLVGL IGNSFVIAVV LRAPRMRTVT 60
61 NYFIVNLAIA DILVIVFCLP ATLIGNIFVP WMLGWLMCKF VPYIQGVSVA ASVYSLIAVS 120
121 LDRFIAIWWP LKQMTKRRAR IMIIGIWVIA LVTTIPWLLF FDLVPAEEVF SDALVSAYSQ 180
181 PQFLCQEVWP PGTDGNLYFL LANLVACYLL PMSLITLCYV LIWIKVSTRS IPGESKDAQM 240
241 DRMQQKSKVK VIKMLVAVVI LFVLSWLPLY VIFARIKFGS DISQEEFEIL KKVMPVAQWL 300
301 GSSNSCINPI LYSVNKKYRR GFAAIIKSRS CCGRLRLVNF
|
| Detection Method: | |
| Confidence: | 41.154902 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
