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View Structure Prediction Details

Protein: gi|71421620
Organism: Trypanosoma cruzi strain CL Brener
Length: 503 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|71421620.

Description E-value Query
Range
Subject
Range
CTTB2_COLGU - Cortactin-binding protein 2 OS=Colobus guereza GN=CTTNBP2 PE=3 SV=1
216.0 [0..7] [503..175]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RWYYATVRSH HETNERLLKQ QRELMELVFL SQGGENAVRH VLTMNEEMRS SALLNCWMMQ  60
   61 EKMREFEKRT QELQNERSHV EAEIQKQEQN LQVMRGLLQK TLEAVQRARD GGAKHHVPES 120
  121 TNVATFVSER TSAGP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.0
Match: 1jadA
Description: C-terminal domain of PLC-beta
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [136-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVSTATMTAP PTTSVPAPPT ASVPAPPTAS VPAPPTTSVP APPTASVPAP PTASVPAPPT  60
   61 ASVPAPPTTS VPAPPTASVP APPTASVPAP PTTSVPAPPT TSVPAPPTAS VPAPPTTSVP 120
  121 APPTTSVPAP PTASVPAPPT TSVPAPPTAS VPAPPTTSVP APPTTSVPAP PT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [308-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSVPAPPTTS VPAPPTASVP APPTASVPAP PTTSVPAPPT TSVPAPPTAS VPAPPTASVP  60
   61 APPTTSLPAP PTASVPAPPT ASVPAPPTTS VPAPPTTSVP APPTASVPAP PTTSLPAPPT 120
  121 TSVPAPPTTS LPAPPTASVP APPTASVPAP PTASVPAPPT ASVPAPPTAS VPAPPTTSVP 180
  181 APPTGPRSGG AKASFS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle