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View Structure Prediction Details

Protein: gi|79331408
Organism: Arabidopsis thaliana
Length: 731 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|79331408.

Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLAASTCL YSWLLVLLLS SVSAIIDEDT QVYIVYMGSL SSRADYIPTS DHMSILQQVT  60
   61 GESSIEGRLV RSYKRSFNGF AARLTESERT LIAEIEGVVS VFPNKILQLH 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.69897
Match: 2p4eP
Description: No description for 2p4eP was found.

Predicted Domain #2
Region A:
Residues: [111-731]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTTSWDFMGV KEGKNTKRNL AIESDTIIGV IDTGIWPESK SFSDKGFGPP PKKWKGVCSG  60
   61 GKNFTCNNKL IGARDYTSEG TRDTSGHGTH TASTAAGNAV KDTSFFGIGN GTVRGGVPAS 120
  121 RIAAYKVCTD SGCSSEALLS SFDDAIADGV DLITISIGFQ FPSIFEDDPI AIGAFHAMAK 180
  181 GILTVSSAGN SGPKPTTVSH VAPWIFTVAA STTNRGFITK VVLGNGKTLA GRSVNAFDMK 240
  241 GKKYPLVYGK SAASSACDAK TAALCAPACL NKSRVKGKIL VCGGPSGYKI AKSVGAIAII 300
  301 DKSPRPDVAF THHLPASGLK AKDFKSLVSY IESQDSPQAA VLKTETIFNR TSPVIASFSS 360
  361 RGPNTIAVDI LKPDITAPGV EILAAFSPNG EPSEDDTRRV KYSVFSGTSM ACPHVAGVAA 420
  421 YVKTFYPRWS PSMIQSAIMT TAKGRGIAST EFAYGAGHVD PMAALNPGLV YELDKADHIA 480
  481 FLCGMNYTSK TLKIISGDTV KCSKKNKILP RNLNYPSMSA KLSGTDSTFS VTFNRTLTNV 540
  541 GTPNSTYKSK VVAGHGSKLS IKVTPSVLYF KTVNEKQSFS VTVTGSDVDS EVPSSANLIW 600
  601 SDGTHNVRSP IVVYIMVVDE A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.522879
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle