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View Structure Prediction Details

Protein: RUVC_BURP0
Organism: Burkholderia pseudomallei 1106a
Length: 180 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RUVC_BURP0.

Description E-value Query
Range
Subject
Range
gi|76811143, gi|... - gi|76811143|ref|YP_334776.1| Holliday junction resolvase [Burkholderia pseudomallei 1710b], gi|76580...
252.0 [0..1] [180..96]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILGIDPGL RVTGFGVIDV SGHQLAYVAS GVIKTPTADL PTRLGTIYDG VSTLIREHTP  60
   61 DQAAIEKVFV NVNPQSTLLL GQARGAAICG LVSGGLPVAE YTALQLKQAV VGYGRATKEQ 120
  121 MQEMVARLLS LSGRPGTDAA DALGMAICHA HGGNTLNTLG GIAPALAKKG LRVRRGRLVG 180
  181 

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Detection Method: PSI-BLAST
Confidence: 51.0
Match: 1hjrA
Description: RuvC resolvase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
exonuclease activity 2.2254764376369 bayes_pls_golite062009
nuclease activity 2.17358374135419 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.75713164321634 bayes_pls_golite062009
hydrolase activity 1.52863974928789 bayes_pls_golite062009
catalytic activity 1.25233849524628 bayes_pls_golite062009
exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 1.19309748194103 bayes_pls_golite062009
deoxyribonuclease activity 1.1219517187744 bayes_pls_golite062009
ribonuclease activity 0.901073799675851 bayes_pls_golite062009
DNA polymerase activity 0.717600245625866 bayes_pls_golite062009
DNA-directed DNA polymerase activity 0.568273228950698 bayes_pls_golite062009
endonuclease activity 0.527074808116937 bayes_pls_golite062009
exodeoxyribonuclease activity 0.278838342302102 bayes_pls_golite062009
exodeoxyribonuclease activity, producing 5'-phosphomonoesters 0.261428436029202 bayes_pls_golite062009
binding 0.122249780594036 bayes_pls_golite062009
3'-5' exonuclease activity 0.115254148049348 bayes_pls_golite062009

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