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View Structure Prediction Details

Protein: CYNS_BURMS
Organism: Burkholderia mallei SAVP1
Length: 156 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYNS_BURMS.

Description E-value Query
Range
Subject
Range
gi|76809590, gi|... - gi|76809590|ref|YP_334834.1| cyanate hydratase [Burkholderia pseudomallei 1710b], gi|76579043|gb|ABA...
276.0 [0..1] [156..264]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQSQHSQSP REALAERIVE AKTRKNLTFE QINEGTGLSV AFTTAALLGQ HPLPADAARV  60
   61 VAAKLDLDDD AQRLLQTIPV RGSIPGGVPT DPTIYRFYEI VQVYGSTLKA LIHEQFGDGI 120
  121 VSAINFKLDI KKVDDPEGGS RAVITLDGKY LPTKPF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.0
Match: 1dw9A
Description: Cyanase N-terminal domain; Cyanase C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
cyanate hydratase activity 4.11383975600118 bayes_pls_golite062009
binding 2.47123111321218 bayes_pls_golite062009
nucleic acid binding 2.15040248098267 bayes_pls_golite062009
DNA binding 2.07628860569491 bayes_pls_golite062009
transcription regulator activity 1.1493158122876 bayes_pls_golite062009
catalytic activity 0.60409960326459 bayes_pls_golite062009
transcription factor activity 0.48307037271624 bayes_pls_golite062009
protein binding 0.253677460522566 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle