YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|126197025, gi...
Organism:	Pseudomonas aeruginosa 2192
Length:	354 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|126197025, gi....

Description	E-value	Query Range	Subject Range
gi\|150959694, gi... - gi\|94413820\|ref\|ZP_01293695.1\| hypothetical protein PaerP_01004337 [Pseudomonas aeruginosa PA7], gi\|...	0.0	[1..354]	[1..354]
gi\|67157473, gi\|... - gi\|67157473\|ref\|ZP_00418722.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase... gi\|67157473 - gi\|67157473\|ref\|ZP_00418722.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase...	0.0	[1..354]	[1..354]
ALF_PSEST - Fructose-bisphosphate aldolase OS=Pseudomonas stutzeri GN=fba PE=3 SV=1	0.0	[1..354]	[1..354]
tr\|F3G922\|F3G922... - Fructose-1,6-bisphosphate aldolase OS=Pseudomonas syringae pv. pisi str. 1704B GN=PSYPI_14768 PE=3 S... gi\|23471428, gi\|... - gi\|66048011\|ref\|YP_237852.1\| fructose-1,6-bisphosphate aldolase [Pseudomonas syringae pv. syringae B...	0.0	[1..354]	[1..354]
gi\|114048737, gi... - gi\|78688837\|ref\|ZP_00853504.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase... gi\|117614120, gi... - gi\|78684629\|ref\|ZP_00849412.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase... gi\|113883804, gi... - gi\|82495123\|ref\|ZP_00880701.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase...	0.0	[1..354]	[1..354]
gi\|71733486, gi\|... - gi\|71733486\|ref\|YP_276914.1\| fructose-1,6-bisphosphate aldolase [Pseudomonas syringae pv. phaseolico...	0.0	[1..354]	[1..354]
gi\|111618272, gi... - gi\|111618272\|ref\|ZP_01405296.1\| ketose-bisphosphate aldolases:Fructose-bisphosphate aldolase, class ...	0.0	[1..354]	[625..978]
SO0933 - fructose-bisphosphate aldolase class II, Calvin cycle subtype gi\|24346525, gi\|... - gi\|24372520\|ref\|NP_716562.1\| fructose-1,6-bisphosphate aldolase [Shewanella oneidensis MR-1], gi\|243...	0.0	[1..354]	[1..354]
gi\|213967836, gi... - gi\|213967836\|ref\|ZP_03395983.1\| fructose-bisphosphate aldolase, class II [Pseudomonas syringae pv. t... gi\|28850855, gi\|... - gi\|28867620\|ref\|NP_790239.1\| fructose-1,6-bisphosphate aldolase [Pseudomonas syringae pv. tomato str... tr\|Q88AK0\|Q88AK0... - Fructose-bisphosphate aldolase, class II OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=fba P...	0.0	[1..354]	[1..354]
gi\|145563669, gi... - gi\|77813077\|ref\|ZP_00812358.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase... gi\|124545705, gi... - gi\|124545705\|ref\|ZP_01704880.1\| fructose-bisphosphate aldolase, class II, Calvin cycle subtype [Shew... gi\|120600092, gi... - gi\|82740539\|ref\|ZP_00903278.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase...	0.0	[1..354]	[1..354]

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Predicted Domain #1

Region A:
Residues: [1-354]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALISMRQML DHAAEFGYGV PAFNVNNLEQ MRAIMEAADK TDSPVIVQAS AGARKYAGAP  60
   61 FLRHLILAAI EEFPHIPVVM HQDHGTSPDV CQRSIQLGFS SVMMDGSLRE DGKTPADYDY 120
  121 NVRVTQQTVA FAHACGVSVE GELGCLGSLE TGMAGEEDGV GAEGVLDHSQ LLTDPEEAAD 180
  181 FVKKTKVDAL AIAIGTSHGA YKFTKPPTGD TLSIQRIKEI HARIPDTHLV MHGSSSVPQD 240
  241 WLAIINEYGG EIKETYGVPV EEIVEGIKYG VRKVNIDTDL RLASTGAIRR FLAQNPSEFD 300
  301 PRKYFSKTVE AMRDICIARY EAFGTAGNAS KIKPISLEGM FQRYARGELD PKVN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	110.0
Match:	2isvA
Description:	No description for 2isvA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits