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View Structure Prediction Details

Protein: RS18_ACTSZ
Organism: Actinobacillus succinogenes 130Z
Length: 75 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RS18_ACTSZ.

Description E-value Query
Range
Subject
Range
RS18_PSYWF - 30S ribosomal protein S18 OS=Psychrobacter sp. (strain PRwf-1) GN=rpsR PE=3 SV=1
121.0 [0..1] [75..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARYFRRRKF CRFTAENVVE IDYKDIATLK NYITESGKIV PSRITGTRAK YQRQLARAIK  60
   61 RARYLALLPY TDNHQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 1vs5R
Description: No description for 1vs5R was found.

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 9.70687222528823 bayes_pls_golite062009
structural molecule activity 9.13243988503345 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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