YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|77633636, gi\|...
Organism:	Yersinia pestis Angola
Length:	105 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|77633636, gi|....

Description	E-value	Query Range	Subject Range
FTSL_ECOLI - Cell division protein ftsL - Escherichia coli gi\|115511493, gi... - gi\|117622369\|ref\|YP_851282.1\| cell division protein FtsL [Escherichia coli APEC O1], gi\|115511493\|gb... gi\|124499074, gi... - gi\|124530650\|ref\|ZP_01701234.1\| cell division protein FtsL [Escherichia coli B], gi\|124499074\|gb\|EAY... gi\|91209147, gi\|... - gi\|91209147\|ref\|YP_539133.1\| cell division protein FtsL [Escherichia coli UTI89], gi\|91070721\|gb\|ABE... gi\|13359543, gi\|... - gi\|15829341\|ref\|NP_308114.1\| cell division protein FtsL [Escherichia coli O157:H7 str. Sakai], gi\|13... gi\|110640296, gi... - gi\|110640296\|ref\|YP_668024.1\| cell division protein FtsL [Escherichia coli 536], gi\|110341888\|gb\|ABG... gi\|110613695, gi... - gi\|110804147\|ref\|YP_687667.1\| cell division protein FtsL [Shigella flexneri 5 str. 8401], gi\|1106136... gi\|194412596, gi... - gi\|194429376\|ref\|ZP_03061901.1\| cell division protein FtsL [Escherichia coli B171], gi\|194412596\|gb\|... gi\|194434418, gi... - gi\|194434418\|ref\|ZP_03066680.1\| cell division protein FtsL [Shigella dysenteriae 1012], gi\|194417334... EG11086 - membrane bound cell division leucine zipper septum protein / Cell division and growth, membrane prot... gi\|194439392, gi... - gi\|194439392\|ref\|ZP_03071469.1\| cell division protein FtsL [Escherichia coli 101-1], gi\|194421651\|gb... gi\|195939299 - gi\|195939299\|ref\|ZP_03084681.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC4024] FTSL_SHIFL - Cell division protein FtsL OS=Shigella flexneri GN=ftsL PE=3 SV=1 gi\|208807328, gi... - gi\|208807328\|ref\|ZP_03249665.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC4206], g... gi\|24050286, gi\|... - gi\|24111528\|ref\|NP_706038.1\| cell division protein FtsL [Shigella flexneri 2a str. 301], gi\|24050286... gi\|208813602, gi... - gi\|208813602\|ref\|ZP_03254931.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC4045], g... FTSL_ECOL6 - Cell division protein FtsL OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=ftsL PE... gi\|208738712, gi... - gi\|208818589\|ref\|ZP_03258909.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC4042], g... gi\|30039892, gi\|... - gi\|30061650\|ref\|NP_835821.1\| cell division protein FtsL [Shigella flexneri 2a str. 2457T], gi\|300398... gi\|209396379, gi... - gi\|209396379\|ref\|YP_002268691.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC4115], ... FTSL_ECO57 - Cell division protein FtsL OS=Escherichia coli O157:H7 GN=ftsL PE=3 SV=1 gi\|169756489, gi... - gi\|170021561\|ref\|YP_001726515.1\| cell division protein FtsL [Escherichia coli ATCC 8739], gi\|1697564... EG11086 - membrane bound cell division leucine zipper septum protein / Cell division and growth, membrane prot... gi\|169887557, gi... - gi\|170079722\|ref\|YP_001729042.1\| membrane bound cell division protein [Escherichia coli str. K-12 su... gi\|15799767, gi\|... - gi\|15799767\|ref\|NP_285779.1\| cell division protein FtsL [Escherichia coli O157:H7 EDL933], gi\|125127... gi\|170518525, gi... - gi\|170680807\|ref\|YP_001742205.1\| cell division protein FtsL [Escherichia coli SMS-3-5], gi\|170518525... gi\|170768602, gi... - gi\|170768602\|ref\|ZP_02903055.1\| cell division protein FtsL [Escherichia albertii TW07627], gi\|170122... gi\|188491137, gi... - gi\|188495938\|ref\|ZP_03003208.1\| cell division protein FtsL [Escherichia coli 53638], gi\|188491137\|gb... gi\|191167777, gi... - gi\|191167777\|ref\|ZP_03029584.1\| cell division protein FtsL [Escherichia coli B7A], gi\|190902203\|gb\|E... gi\|191174642, gi... - gi\|191174642\|ref\|ZP_03036124.1\| cell division protein FtsL [Escherichia coli F11], gi\|190905077\|gb\|E... gi\|192926468, gi... - gi\|193065881\|ref\|ZP_03046942.1\| cell division protein FtsL [Escherichia coli E22], gi\|192926468\|gb\|E... gi\|218698506, gi... - gi\|218698506\|ref\|YP_002406135.1\| cell division protein FtsL [Escherichia coli IAI39], gi\|218368492\|e... gi\|218430440, gi... - gi\|218703343\|ref\|YP_002410862.1\| cell division protein FtsL [Escherichia coli UMN026], gi\|218430440\|... gi\|209917276, gi... - gi\|209917276\|ref\|YP_002291360.1\| cell division protein FtsL [Escherichia coli SE11], gi\|209910535\|db... gi\|215263321, gi... - gi\|215485249\|ref\|YP_002327680.1\| cell division protein FtsL [Escherichia coli O127:H6 str. E2348/69]... gi\|217321296, gi... - gi\|217325075\|ref\|ZP_03441159.1\| cell division protein FtsL [Escherichia coli O157:H7 str. TW14588], ... gi\|218547540, gi... - gi\|218547540\|ref\|YP_002381331.1\| cell division protein FtsL [Escherichia fergusonii ATCC 35469], gi\|... gi\|218552666, gi... - gi\|218552666\|ref\|YP_002385579.1\| cell division protein FtsL [Escherichia coli IAI1], gi\|218359434\|em... gi\|218363792, gi... - gi\|218557023\|ref\|YP_002389936.1\| cell division protein FtsL [Escherichia coli S88], gi\|218363792\|emb... gi\|218425524, gi... - gi\|218687960\|ref\|YP_002396172.1\| cell division protein FtsL [Escherichia coli ED1a], gi\|218425524\|em... gi\|218350284, gi... - gi\|218693552\|ref\|YP_002401219.1\| cell division protein FtsL [Escherichia coli 55989], gi\|218350284\|e... FTSL_ECOL6 - Cell division protein FtsL OS=Escherichia coli O6 GN=ftsL PE=3 SV=1 gi\|168751407, gi... - gi\|188014521\|gb\|EDU52643.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC4113], gi\|16... gi\|189357021, gi... - gi\|189357021\|gb\|EDU75440.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC4401], gi\|16... gi\|168764038, gi... - gi\|189365873\|gb\|EDU84289.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC4501], gi\|16... gi\|168771307, gi... - gi\|189359916\|gb\|EDU78335.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC4486], gi\|16... gi\|187767739, gi... - gi\|187767739\|gb\|EDU31583.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC4196], gi\|16... gi\|168781968, gi... - gi\|189000450\|gb\|EDU69436.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC4076], gi\|16... gi\|189370831, gi... - gi\|189370831\|gb\|EDU89247.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC869], gi\|168... gi\|189376367, gi... - gi\|189376367\|gb\|EDU94783.1\| cell division protein FtsL [Escherichia coli O157:H7 str. EC508], gi\|168... gi\|89106966, gi\|... - gi\|89106966\|ref\|AP_000746.1\| membrane bound cell division protein at septum containing leucine zippe... FTSL_SHIDS - Cell division protein FtsL OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ftsL PE=3 SV=1 gi\|82542687, gi\|... - gi\|82542687\|ref\|YP_406634.1\| cell division protein FtsL [Shigella boydii Sb227], gi\|81244098\|gb\|ABB6... gi\|187733151, gi... - gi\|75175640\|ref\|ZP_00695848.1\| COG3116: Cell division protein [Shigella boydii BS512], gi\|187733151\|... gi\|193070835, gi... - gi\|75234320\|ref\|ZP_00718698.1\| COG3116: Cell division protein [Escherichia coli E110019], gi\|1930708... gi\|74310702, gi\|... - gi\|74310702\|ref\|YP_309121.1\| cell division protein FtsL [Shigella sonnei Ss046], gi\|73854179\|gb\|AAZ8... gi\|75189183, gi\|... - gi\|75189183\|ref\|ZP_00702450.1\| COG3116: Cell division protein [Escherichia coli E24377A], gi\|1571568... gi\|75194300, gi\|... - gi\|75194300\|ref\|ZP_00704370.1\| COG3116: Cell division protein [Escherichia coli HS], gi\|157159554\|re... gi\|254791220, gi... - gi\|254791220\|ref\|YP_003076057.1\| membrane bound cell division protein at septum containing leucine z... gi\|254160205, gi... - gi\|254160205\|ref\|YP_003043313.1\| membrane bound cell division protein at septum containing leucine z... gi\|226840604, gi... - gi\|254037498\|ref\|ZP_04871575.1\| cell division protein FtsL [Escherichia sp. 1_1_43], gi\|226840604\|gb... gi\|253325931, gi... - gi\|254287008\|ref\|YP_003052756.1\| membrane bound cell division protein at septum containing leucine z... gi\|251783646, gi... - gi\|251783646\|ref\|YP_002997950.1\| hypothetical protein B21_00083 [Escherichia coli BL21], gi\|24237591... gi\|238899484, gi... - gi\|238899484\|ref\|YP_002925280.1\| membrane bound cell division protein at septum containing leucine z... gi\|226902144, gi... - gi\|237704232\|ref\|ZP_04534713.1\| cell division protein FtsL [Escherichia sp. 3_2_53FAA], gi\|226902144... gi\|227837841, gi... - gi\|227885012\|ref\|ZP_04002817.1\| cell division protein FtsL [Escherichia coli 83972], gi\|227837841\|gb...	1.0E-33	[1..105]	[16..120]
gi\|75511693 - gi\|75511693\|ref\|ZP_00734331.1\| COG3116: Cell division protein [Escherichia coli 53638] gi\|75256045 - gi\|75256045\|ref\|ZP_00727758.1\| COG3116: Cell division protein [Escherichia coli E22] gi\|75235488 - gi\|75235488\|ref\|ZP_00719692.1\| COG3116: Cell division protein [Escherichia coli F11] gi\|75229068 - gi\|75229068\|ref\|ZP_00715648.1\| COG3116: Cell division protein [Escherichia coli B7A] gi\|75209396 - gi\|75209396\|ref\|ZP_00709628.1\| COG3116: Cell division protein [Escherichia coli B171] gi\|83585195 - gi\|83585195\|ref\|ZP_00923845.1\| COG3116: Cell division protein [Escherichia coli 101-1]	1.0E-33	[1..105]	[1..105]
gi\|168230400, gi... - gi\|205334916\|gb\|EDZ21680.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|168234885, gi... - gi\|197291713\|gb\|EDY31063.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|205337468, gi... - gi\|205337468\|gb\|EDZ24232.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|205348752, gi... - gi\|205348752\|gb\|EDZ35383.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|167550684, gi... - gi\|205324375\|gb\|EDZ12214.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|205331517, gi... - gi\|205331517\|gb\|EDZ18281.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... lcl\|NC_016856.1_... - [gene=ftsL] [protein=cell division protein FtsL] [protein_id=YP_005235780.1] [location=142057..14242... gi\|205271241, gi... - gi\|205351460\|ref\|YP_002225261.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|206707438, gi... - gi\|207855635\|ref\|YP_002242286.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|213052856 - gi\|213052856\|ref\|ZP_03345734.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|213426161 - gi\|213426161\|ref\|ZP_03358911.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|197361329, gi... - gi\|197361329\|ref\|YP_002140964.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|198242976, gi... - gi\|198242976\|ref\|YP_002214073.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|199604598, gi... - gi\|200387500\|ref\|ZP_03214112.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|204926902, gi... - gi\|204926902\|ref\|ZP_03218104.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... FTSL_SALTY - Cell division protein FtsL OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=ftsL P... gi\|194456693, gi... - gi\|194470329\|ref\|ZP_03076313.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|29136290, gi\|... - gi\|29140666\|ref\|NP_804008.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar... gi\|194737711, gi... - gi\|194737711\|ref\|YP_002113139.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|197214276, gi... - gi\|197250573\|ref\|YP_002145107.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|25367070, gi\|... - gi\|25367070\|pir\|\|AF0517 cell division protein FtsL [imported] - Salmonella enterica subsp. enterica ... gi\|197242234, gi... - gi\|197263979\|ref\|ZP_03164053.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|168464327, gi... - gi\|195632742\|gb\|EDX51196.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|205342475, gi... - gi\|205342475\|gb\|EDZ29239.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar ... gi\|16759116 - gi\|16759116\|ref\|NP_454733.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar... gi\|194404869, gi... - gi\|194446206\|ref\|YP_002039353.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|194448775, gi... - gi\|194448775\|ref\|YP_002044091.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|56126650, gi\|... - gi\|56412393\|ref\|YP_149468.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar... gi\|213979947 - gi\|213979947\|ref\|ZP_03407206.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|224581964, gi... - gi\|224581964\|ref\|YP_002635762.1\| cell division protein FtsL [Salmonella enterica subsp. enterica ser... gi\|237729381, gi... - gi\|237729381\|ref\|ZP_04559862.1\| cell division protein FtsL [Citrobacter sp. 30_2], gi\|226909110\|gb\|E... gi\|238911178 - gi\|238911178\|ref\|ZP_04655015.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|213585690 - gi\|213585690\|ref\|ZP_03367516.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|213612819 - gi\|213612819\|ref\|ZP_03370645.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|213647634 - gi\|213647634\|ref\|ZP_03377687.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... gi\|213858023 - gi\|213858023\|ref\|ZP_03384994.1\| cell division protein FtsL [Salmonella enterica subsp. enterica sero... FTSL_SALTY - Cell division protein FtsL OS=Salmonella typhimurium GN=ftsL PE=3 SV=1	7.0E-33	[1..105]	[16..120]
gi\|62178688, gi\|... - gi\|62178688\|ref\|YP_215105.1\| cell division protein FtsL [Salmonella enterica subsp. enterica serovar...	1.0E-31	[1..105]	[16..120]
gi\|13537267 - gi\|13537267\|dbj\|BAB40619.1\| hypothetical protein [Vibrio proteolyticus]	6.0E-31	[2..103]	[1..102]
gi\|75823702, gi\|... - gi\|75823702\|ref\|ZP_00753187.1\| COG3116: Cell division protein [Vibrio cholerae RC385], gi\|116216871\|... gi\|75829622, gi\|... - gi\|75829622\|ref\|ZP_00758919.1\| COG3116: Cell division protein [Vibrio cholerae MO10], gi\|254849530\|r... gi\|75827675, gi\|... - gi\|75827675\|ref\|ZP_00757110.1\| COG3116: Cell division protein [Vibrio cholerae O395], gi\|227118852\|r... gi\|121728370, gi... - gi\|75816043\|ref\|ZP_00746526.1\| COG3116: Cell division protein [Vibrio cholerae V52], gi\|121728370\|re... FTSL_VIBCH - Cell division protein FtsL OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) ... FTSL_VIBCH - Cell division protein FtsL OS=Vibrio cholerae GN=ftsL PE=3 SV=1 gi\|229369691, gi... - gi\|229607036\|ref\|YP_002877684.1\| hypothetical protein VCD_001945 [Vibrio cholerae MJ-1236], gi\|22936... gi\|229332379, gi... - gi\|229528605\|ref\|ZP_04417995.1\| hypothetical protein VCG_001691 [Vibrio cholerae 12129(1)], gi\|22933... gi\|229524394, gi... - gi\|229524394\|ref\|ZP_04413799.1\| hypothetical protein VCA_001986 [Vibrio cholerae bv. albensis VL426]... gi\|229341771, gi... - gi\|229521239\|ref\|ZP_04410659.1\| hypothetical protein VIF_001763 [Vibrio cholerae TM 11079-80], gi\|22... gi\|229519410, gi... - gi\|229519410\|ref\|ZP_04408853.1\| hypothetical protein VCC_003440 [Vibrio cholerae RC9], gi\|229344099\|... gi\|229507530, gi... - gi\|229507530\|ref\|ZP_04397035.1\| hypothetical protein VCF_002759 [Vibrio cholerae BX 330286], gi\|2293... gi\|227010419, gi... - gi\|227082531\|ref\|YP_002811082.1\| cell division protein FtsL [Vibrio cholerae M66-2], gi\|227010419\|gb... gi\|150422306, gi... - gi\|254291794\|ref\|ZP_04962579.1\| cell division protein FtsL [Vibrio cholerae AM-19226], gi\|197750881\|... gi\|121587621, gi... - gi\|121587621\|ref\|ZP_01677385.1\| cell division protein FtsL [Vibrio cholerae 2740-80], gi\|121548131\|g... gi\|153214094, gi... - gi\|153214094\|ref\|ZP_01949228.1\| cell division protein FtsL [Vibrio cholerae 1587], gi\|124115520\|gb\|E... gi\|153826870, gi... - gi\|153826870\|ref\|ZP_01979537.1\| cell division protein FtsL [Vibrio cholerae MZO-2], gi\|149739286\|gb\|... gi\|124117722, gi... - gi\|153224282\|ref\|ZP_01954351.1\| cell division protein FtsL [Vibrio cholerae MAK 757], gi\|124117722\|g... gi\|148874156, gi... - gi\|153830349\|ref\|ZP_01983016.1\| cell division protein FtsL [Vibrio cholerae 623-39], gi\|148874156\|gb... gi\|153802791, gi... - gi\|153802791\|ref\|ZP_01957377.1\| cell division protein FtsL [Vibrio cholerae MZO-3], gi\|124121656\|gb\|... gi\|153818409, gi... - gi\|153818409\|ref\|ZP_01971076.1\| cell division protein FtsL [Vibrio cholerae NCTC 8457], gi\|126511042... gi\|229512274, gi... - gi\|229512274\|ref\|ZP_04401753.1\| hypothetical protein VCE_003686 [Vibrio cholerae B33], gi\|229352239\|...	1.0E-30	[1..103]	[1..103]
gi\|77958242 - gi\|77958242\|ref\|ZP_00822279.1\| COG3116: Cell division protein [Yersinia bercovieri ATCC 43970] gi\|77962091 - gi\|77962091\|ref\|ZP_00825916.1\| COG3116: Cell division protein [Yersinia mollaretii ATCC 43969]	3.0E-30	[1..105]	[1..105]
gi\|77976107 - gi\|77976107\|ref\|ZP_00831640.1\| COG3116: Cell division protein [Yersinia frederiksenii ATCC 33641]	5.0E-30	[1..105]	[1..105]
gi\|77977559 - gi\|77977559\|ref\|ZP_00833004.1\| COG3116: Cell division protein [Yersinia intermedia ATCC 29909]	2.0E-29	[1..105]	[1..105]
gi\|84394441, gi\|... - gi\|84394441\|ref\|ZP_00993157.1\| Cell division protein FtsL [Vibrio splendidus 12B01], gi\|84374940\|gb\|...	3.0E-29	[2..103]	[1..102]

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Predicted Domain #1

Region A:
Residues: [1-105]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGNERHGLV GVIGADLIRN AKIPLILLVA VLISAVLVVT TAHRTRLLTA EREQLVLERD  60
   61 ALDIEWRNLI LEENALGDHS RVESIAIEKL KMQHVDPSQE NIVIK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	51.60206
Match:	PF04999.4
Description:	No description for PF04999.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.734	N/A	N/A	a.5.7	4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View	Download	0.577	N/A	N/A	a.56.1	CO dehydrogenase ISP C-domain like
View	Download	0.552	N/A	N/A	a.44.1	Disulphide-bond formation facilitator (DSBA), insertion domain
View	Download	0.511	N/A	N/A	a.56.1	CO dehydrogenase ISP C-domain like
View	Download	0.419	N/A	N/A	a.52.1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits