| Protein: | gi|62734196, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 2406 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for gi|62734196, gi|....
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MGRSPCCEKA HTNKGAWTKE EDQRLIAYIK ANGEGCWRSL PKAAGLLRCG KSCRLRWINY 60
61 LRPDLKRGNF TEEEDEFIIK LHELLGNKWS LIAGRLPGRT DNEIKNYWNT HIKRKLLARG 120
121 VDPQTHRPLN AAAD
|
| Detection Method: |  |
| Confidence: | 41.0 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [135-350] |
1 11 21 31 41 51
| | | | | |
1 HHQQQQLQAP RRFAAAPAGH HHHHPDHFAV LSNSPEACSH SSDDEPSSAT PPPPPRHLGI 60
61 DLNLSISLAP YQPQDQTSEP MKQEEDDEAS ATANGAGNAA MTTTATTAAV CLCLNRLGLH 120
121 GGEVEMDRQW MYADRRSKEF IDGVHYFLRV AEANRQRGFI CCPCNKCKNQ KEYSASRTIH 180
181 FHLFESGFMP SYNCWTSHGE QGVEMEEDEV EDDNIP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [351-603] |
1 11 21 31 41 51
| | | | | |
1 DFAQYVGFEG NQTGEEEIAA DGNDVADDLG QMLQDAREDC ESEKEAHKLD KMLEDHRNSL 60
61 YPGCEQGHKK LDTTLELLQW KAKNGVSDKA FGDLLKLVKN ILPGGNKLPE TTYEAKKIVC 120
121 PLGLEVHKIH ACPNDCILYR GEEYENLEAC PVCKALRYKI RRDDPGEVNG QLTKKRIPAK 180
181 VMWYFPIIPR LRRLFRNKGN ARMLRWHAEE RQQDGMLRHP ADGSQWRNID RKFKEFGKDA 240
241 RNIRFGLSTD GMN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [604-727] |
1 11 21 31 41 51
| | | | | |
1 PFGEMSSGHS TWPVTMCIYN LPPWLCMKRK YIMMPIIIQG PKQPGNDIDV YLRPLVEDLK 60
61 QLWKKEGVPV WDEDKQEEFN LRALLFVTIN NWPALSNLSG QSNKGYKACT HCMDETESTY 120
121 LKHC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [728-845] |
1 11 21 31 41 51
| | | | | |
1 RKVVYMGHRR FLAANHPVRK KGKHFEHKAD HRTKPKHRSG KTVFAMVKDL KVVFGKGPGS 60
61 QHIESEDGHA AMWKKNSIFW ELPYWEFLDV RHAIDVMHLT KNLCVNLLGF LGVYGKSK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [846-1009] |
1 11 21 31 41 51
| | | | | |
1 DTLEARNDLK HMEQRGDLHP EPKEKGSHYL SPASYTLSKA EKESMFECLE SIKVPSGYST 60
61 NIKRIISTKE KKFTNLKSHD CHVLMTQLLP VVIRGILPDN VRATITKLCA FMNAISQKVI 120
121 DPDRLEALQN EVVQCLVSFE LIFPPSFFNI MTHLLCHLVK EIRI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1010-1186] |
1 11 21 31 41 51
| | | | | |
1 LGPMYLHNMF PFERYMGVLK KYVRNRARPE ASIAKGYGTE EVIEFCVEFI EDLRPIGVPE 60
61 SRHEGRLRGK GTLGRKAIMT VDNNLFRKAH FTVLQHSSLV APYIEEHLAL VRARNIGKSD 120
121 AWITRHHIDT FPAWLRQHLM GNESINQQLA FLARGPSGSI ATFQGYEING YTFYTRA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1187-1264] |
1 11 21 31 41 51
| | | | | |
1 QDMKSTNQNS AVRVDAMGHD GTTATYYGAI EDIWELDYGP LKVPLFRCQW VRLTGGGVMI 60
61 DDSGMTTVDL NKVGYSDE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1265-2120] |
1 11 21 31 41 51
| | | | | |
1 PFVLANDVTQ VFFVKDMSSK GKKGRGPDEP KRQVVLPGKR KIVGVEDKTD EDYDQLDGQP 60
61 PFTVTIDPSI LLSNEDTPYS RSDHKEGTIM ADRDEEQILY DTIAEGSSQY WNEEEGNEDP 120
121 NQYLNEEGNV ERDAEGNQQG HVERDVEGNQ EEEASGSQPS VGQKRARGQR GAAKKLEGRH 180
181 IITEVEEDGR PSAPAEAAKN YVRHSGWVVR DNVPVSTVYW RRTRARGDHE SFVQDSEKEM 240
241 LWTTMLETFT LPAGTEDKVK RWTLKKMAEQ FQSFKGDLYQ KYILKGQTPN FDTFPKLRDH 300
301 WDEFVAYKTG EQGKAMMERN KENAAKKKYH HHLGSGGYSV AMPKWEQMEA SLIERGIEPA 360
361 TANWPERSKF WYYAHGGTLN PADGSLVFGY QIQEAVRRLT DAVEASSQGT FRPDRDRDEL 420
421 TLALQTPEHP GRTRGKGVIP WKIGFKEDIH TYRSRIRSKR DTEAKIADLE FRVSSYELNM 480
481 QEEVARKVDE RMAAHRSHDP QPTIPPAMVS PSGNRSSCAS TGQVGSQSMD AMQTQDESTC 540
541 PVDDITQRTP CELHIPFKNL SIKVASGMAI PTDPSGTYHC RPIPAGYSKV EVELVEGAYE 600
601 DLELDYPGGD GETHLRDTCH AIILWRRRYI ILPGRQAASR APSPPAPPSP PQDPAPSPPH 660
661 APPAPSPPQA PASTPQDPAP TPPRAPTPTP PQAPVPAPSK SRAPPAPPLA HTRATKKAKV 720
721 DAAKNKDPGY DCTQEELDAY VASEVKRQFK PRSPEKKIPI DPSVRNFFRG MSASVKEAIK 780
781 LSDYEQTLKK ASSGKSKPVP QLGEQPNQEI EPLVTGKEMT IEQFITDTGL TTDQLLGVAP 840
841 IEKAEVKYMY ELGKPL
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [2121-2406] |
1 11 21 31 41 51
| | | | | |
1 VKPELLQSLP TQMYKFHQLY MEMSATGREM IGARIRDTDF LQGDDILWIN FRGIYELYQL 60
61 DALDVSIMSC WILMEIQRAR RRRVFDTGFI DPRKVNVAML DQYPQETEDN LVHLLKAQHY 120
121 KTFILLPYNT EFHWVLLLID LEACTVNVYD SMDKKESTFD KVFELIDRAW YRFRHLVRGK 180
181 WRERLRRKFK FPCAKQKQGT NLCGYYVCEY CHCLADQIIT TRELDFIRMR DNLTTHKEFI 240
241 AAVQEQLMGF INEEILDPKG EFYYDGNTIH RSLASELAAS TTTSKS
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 2iycA |
| Description: | No description for 2iycA was found. |
