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View Structure Prediction Details

Protein: gi|77550353, gi|...
Organism: Oryza sativa Japonica Group
Length: 925 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|77550353, gi|....

Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLRKGKQD GHAQRQHLHL RRDMTTSSRD AYEVHDYNFA QVACKLPVYD GKYDSAAYIN  60
   61 WELAVEKQFD EYDFSNAQMI KAASNKCTGS ASFWWHTVGN KLETWDECKI LMRKRFVFSY 120
  121 YRRALLEKFE HLKQGDKTVR EYFHDFKICI TYSGLQESNE NTMTRFFRGL NSNIQAGLVN 180
  181 VTYNHIGQLF MLACNVEHKI LENPTEQQAM RVPPIADVL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 17.075721
Match: PF03732.9
Description: No description for PF03732.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [220-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEVQNNPQNE KNDMFEMSLP SLANEEKADA PTLSEEGIKG KLNGAEITQG IGLICTGKIN  60
   61 NPRRVYQDTW NSLPMGDEAA QALELMDRMI KLKEQGLQGE QITRHFIKSR LAPIKERSRT 120
  121 AFEFDGKHDP NREDPDSLDF KVMKERMYKI FSNAIVVSYS HLLPVVPYNA FNPPPPEFAL 180
  181 MKSDPPIAQR RSPRRQPGQG SGGPKIRSET QPNTSNPAGQ SDSR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [444-545]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRKLLLSDDE GDDAGKLGDK GATGKLPKQA NPKKKTSSRP MPKIRKSSRK PSDIDPSGKD  60
   61 SDPINMETGS SKETGPTAKD HPSDNQPATD NVEPSNEPPT GS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [546-602]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSAEAGIGIN QESPTGNQSD TGPSQEIPEV EAQADSPPGK DASTDPGSRS PIKAQEP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [603-685]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TCPRPEIITG LMIGDEEEIL LIRAAEDSRP PILVKWWDDD MQPQGIVINM QKEDEEVCLL  60
   61 KKALSQATRI VNRIHLRNEA KTA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [686-925]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLDKLVPHLG TLEATRDQLH EAKELARKTE HDLRDRIAEL QESNFELSGS SKGNIVQAAR  60
   61 ISQLEKQIQT LENDKAELAR QRDSALKDVE DRKIKSQAQF DVLVGKIKRL EGARDEVANA 120
  121 TTALVQAMFF NNNGPSTFDA SEIFDKLTVA PDTYFKNINE AGSMGASLAL AMTKSLSPKI 180
  181 DIDAIDGFAE GTSEEAALDL INDAQKATDK IAVDVVERFQ DTDLRPTGPD NSDNEKTDTD 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.154902
Match: 2tmaA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle