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View Structure Prediction Details

Protein: gi|78184106, gi|...
Organism: Synechococcus sp. CC9902
Length: 99 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|78184106, gi|....

Description E-value Query
Range
Subject
Range
FER_MASLA - Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2
gi|2623659 - gi|2623659|gb|AAC04840.1| ferredoxin [Fischerella sp. PCC 7605]
135.0 [0..1] [99..1]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASYKVTLVS ESEGLNKTIE VPDDQYILDA AEEQGIDLPY SCRAGACSTC AGKITAGTVD  60
   61 QSDQSFLDDD QIEAGFVLTC VAYPTSDCTI KTHAEEELY

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Detection Method: PSI-BLAST
Confidence: 31.522879
Match: 1rfkA
Description: Crystal Structure of 2Fe2S Ferredoxin from Thermophilic Cyanobacterium Mastigocladus Laminosus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle