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View Structure Prediction Details

Protein: gi|186502775, gi...
Organism: Arabidopsis thaliana
Length: 407 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|186502775, gi....

Description E-value Query
Range
Subject
Range
gi|7270047, gi|1... - gi|91805619|gb|ABE65538.1| hypothetical protein At4g31440 [Arabidopsis thaliana], pir||T10674 hypoth...
340.0 [0..1] [404..1]
gi|116310846, gi... - gi|125550060|gb|EAY95882.1| hypothetical protein OsI_17748 [Oryza sativa Indica Group], gi|116310846...
322.0 [0..8] [404..34]
gi|113565698, gi... - gi|115461054|ref|NP_001054127.1| Os04g0658100 [Oryza sativa (japonica cultivar-group)], gi|113565698...
321.0 [0..8] [404..36]
gi|102139849 - gi|102139849|gb|ABF70007.1| hypothetical protein MA4_8L21.20 [Musa acuminata]
267.0 [0..5] [402..6]
gi|169769486 - gi|169769486|ref|XP_001819213.1| hypothetical protein [Aspergillus oryzae RIB40]
gi|83767071 - gi|83767071|dbj|BAE57211.1| unnamed protein product [Aspergillus oryzae]
260.0 [0..5] [403..40]
gi|67900922, gi|... - gi|67900922|ref|XP_680717.1| hypothetical protein AN7448.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
258.0 [0..5] [403..1586]
gi|92874219 - gi|92874219|gb|ABE82521.1| hypothetical protein MtrDRAFT_AC137703g21v2 [Medicago truncatula]
253.0 [0..7] [402..13]
gi|46136787, gi|... - gi|46136787|ref|XP_390085.1| hypothetical protein FG09909.1 [Gibberella zeae PH-1], gi|42547292|gb|E...
251.0 [0..7] [381..45]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRSQDQRIS LCELKEHIVK KTGVERSRRY FYYLGRFLSQ KLTKSEFDKT CLRLLGRENL  60
   61 SLHNQLIRSI LRNATVAKSP PPDHEAGHST KANAFQSRGD GLEQSGTLIP NHSQHEPVWS 120
  121 NGVLPISPRK VRSGMQNRKS RDRPSPLGSN GKVEHMLHQP VCRE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DNRGSVGMEN GDYQRSGRYV ADEKDGEFLR PVEKPRIPNK EKIAAVSMRD DQNQEEQARV  60
   61 NLSMSPLIAP LGIPFCSASV GGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [248-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRTIPVSTNA ELISCYDSGG LPDIEMLRKR MENIAVAQGL EGVSMECAKT LNNMLDVYLK  60
   61 KLINSCFDLV GARSTNGDPG KQRIGKQQSQ NKIVNGVWPT NSLKIQTPNG SSDIRQDHHS 120
  121 VSMLDFRTAM ELNPRQLGED WPTLRERISL RSFEEQDFEV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle