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View Structure Prediction Details

Protein: gi|123998833, gi...
Organism: synthetic construct
Length: 138 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123998833, gi....

Description E-value Query
Range
Subject
Range
KISS1 - KiSS-1 metastasis-suppressor
5.0E-58 [1..134] [1..134]
gi|60810099, gi|... - gi|60810101|gb|AAX36106.1| KiSS-1 metastasis-suppressor [synthetic construct], gi|60810099|gb|AAX361...
3.0E-56 [1..138] [1..138]
gi|55589150 - gi|55589150|ref|XP_514123.1| PREDICTED: KiSS-1 metastasis-suppressor [Pan troglodytes]
1.0E-54 [1..138] [1..138]
gi|37730550 - gi|37730550|gb|AAO64981.1| KISS1 peptide ligand [Mus musculus]
2.0E-50 [1..122] [27..146]
gi|109018732 - gi|109018732|ref|XP_001098284.1| PREDICTED: similar to KiSS-1 metastasis-suppressor [Macaca mulatta]
1.0E-49 [1..128] [1..128]
KISS1_RAT - Metastasis-suppressor KiSS-1 OS=Rattus norvegicus GN=Kiss1 PE=2 SV=1
7.0E-49 [1..132] [1..130]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLVSWQLL LFLCATHFGE PLEKVASVGN SRPTGQQLES LGLLAPGEQS LPCTERKPAA  60
   61 TARLSRRGTS LSPPPESSGS PQQPGLSAPH SRQIPAPQGA VLVQREKDLP NYNWNSFGLR 120
  121 FGKREAAPGN HGRSAGRG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle