| Protein: | CG11155-PA, FBpp... |
| Organism: | Drosophila melanogaster |
| Length: | 910 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11155-PA, FBpp....
| Description | E-value | Query Range |
Subject Range |
|
|
564.0 | [0..3] | [888..1] |
|
Region A: Residues: [1-503] |
1 11 21 31 41 51
| | | | | |
1 MVRKKREIVI KENIQGRSYL KKICCSYIIL SILVISNALP PVIRVGAIFT EDERESSIES 60
61 AFKYAIYRIN KEKTLLPNTQ LVYDIEYVPR DDSFRTTKKV CSQLEAGVQA IFGPTDALLA 120
121 SHVQSICEAY DIPHIEGRID LEYNSKEFSI NLYPSHTLLT LAYRDIMVYL NWTKVAIIYE 180
181 EDYGLFNLMH SSTETKAEMY IRQASPDSYR QVLRAIRQKE IYKIIVDTNP SHIKSFFRSI 240
241 LQLQMNDHRY HYMFTTFDLE TYDLEDFRYN SVNITAFRLV DVDSKRYLEV INQMQKLQHN 300
301 GLDTINGSPY IQTESALMFD SVYAFANGLH FLNLDNHQNF YIKNLSCTSD QTWNDGISLY 360
361 NQINAAITDG LTGTVQFVEG RRNIFKLDIL KLKQEKIQKV GYWHPDDGVN ISDPTAFYDS 420
421 NIANITLVVM TREERPYVMV KEDKNLTGNL RFEGFCIDLL KAIATQVGFQ YKIELVPDNM 480
481 YGVYIPETNS WNGIVQELME RRA
|
| Detection Method: |  |
| Confidence: | 42.69897 |
| Match: | 2e4uA |
| Description: | No description for 2e4uA was found. |
|
Region A: Residues: [504-591] |
1 11 21 31 41 51
| | | | | |
1 DLAVASMTIN YARESVIDFT KPFMNLGIGI LFKVPTSQPT RLFSFMNPLA IEIWLYVLAA 60
61 YILVSFALFV MARFSPYEWK NPHPCYKE
|
| Detection Method: | |
| Confidence: | 2.17 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [592-807] |
1 11 21 31 41 51
| | | | | |
1 TDIVENQFSI SNSFWFITGT FLRQGSGLNP KATSTRIVGG CWFFFCLIII SSYTANLAAF 60
61 LTVERMISPI ESASDLAEQT EISYGTLEGG STMTFFRDSK IGIYQKMWRY MENRKTAVFV 120
121 KTYEDGIKRV MEGSYAFLME STMLDYAVQR DCNLTQIGGL LDSKGYGIAT PKGSPWRDKI 180
181 SLAILELQEK GIIQILYDKW WKNTGDVCNR DDKSKE
|
| Detection Method: | |
| Confidence: | 33.0 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [808-910] |
1 11 21 31 41 51
| | | | | |
1 SKANALGVEN IGGVFVVLLC GLALAVVVAI FEFCWNSRKN LNTENQSLCS EMAEELRFAM 60
61 HCHGSKSRHR PRKRSCLNCS SVPTYVPSNV STSNVGVYYN YFN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
