YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Gr47a-PA
Organism: Drosophila melanogaster
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr47a-PA.

Description E-value Query
Range
Subject
Range
gi|125808667, gi... - gi|54635994|gb|EAL25397.1| GA11896-PA [Drosophila pseudoobscura], gi|125808667|ref|XP_001360822.1| G...
209.0 [0..238] [400..1]

Back

Predicted Domain #1
Region A:
Residues: [1-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPFIAPLVM NNQTINTGLI GLTQRPIKQA VKQIQLAVLR MAFTSSQLCS LLTKFTALNG  60
   61 LNTYYFDTKT NAFRVSSKLK IYCAIHHALC VLALAHMSYS TASNLRVSVT VLTIGGTMAC 120
  121 CVKSCWEKAQ GIRNLARGLV TMEQKYFAGR PSGLLLKCRY YIKITFGSIT LLRIHLIQPI 180
  181 YMRRLLPSQF YLNVGAYWLL YNMLLAAVLG FYFLLWEMCR IQKLINDQMT LILARS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [237-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQRNRLKKMQ HCLRLYSKLL LLCDQFNSQL GHVAIWVLAC KSWCQITFGY EIFQMVAAPK  60
   61 SIDLTMSMRV FVIFTYIFDA MNLFLGTDIS ELFSTFRADS QRILRETSRL DRLLSMFALK 120
  121 LALHPKRVVL LNVFTFDRKL TLTLLAKSTL YTICCLQNDY NKLKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle