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View Structure Prediction Details

Protein: gi|222619145, gi...
Organism: Oryza sativa Japonica Group
Length: 194 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222619145, gi....

Description E-value Query
Range
Subject
Range
gi|4959712 - gi|4959712|gb|AAD34459.1|AF136010_1 SPP30 [Solanum chacoense]
244.0 [0..1] [194..1]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGVGKAKQY ANVLDKPLSR GRQEVSLSAF AFLFSELVQY NQTQVDNIAE LERRLEDAGY  60
   61 AVGARVLELL CHREKGNRRE TRLLGILSFI HSTVWKVLFG KVADSLEKGT EHEDEYMISE 120
  121 KELLVNRFIS VPKDMGAFNC GAFVAGIVRG VLENAGFPAV VTAHFVPIEG QQRPRTTILI 180
  181 KFAEEVLQRE ARFG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.69897
Match: 2j3wB
Description: No description for 2j3wB was found.

Predicted functions:

Term Confidence Notes
Rab guanyl-nucleotide exchange factor activity 5.6079912636527 bayes_pls_golite062009
binding 1.59771877750275 bayes_pls_golite062009
protein binding 1.1027485517601 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle