YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|115439705, gi...
Organism: Oryza sativa Japonica Group
Length: 318 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115439705, gi....

Description E-value Query
Range
Subject
Range
gi|50728342 - gi|50728342|ref|XP_416098.1| PREDICTED: similar to transmembrane protein 19 [Gallus gallus]
262.0 [0..58] [311..266]

Back

Predicted Domain #1
Region A:
Residues: [1-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACSLLPPLA PVSPPPRLLL PSSRSALLPR GPRVAPRVPV SPPRALPDTA VGAAEALRGA  60
   61 LADAFLASPP TWRSAAVSNL AIFVAGSPVL LSGLSASGFA AAYLLGTLTW RAFGPKGLVL 120
  121 VASYFVLGTA ATKLKIKQKE ALGVAEKRGG RRGTGSVIGS SAAGCVCALL SIYNVGSAAL 180
  181 AELWRLGFVA SYCTKLSDTV SSEIGKAYGR TTYLVTTLKV VPRGTEGAIS IEGTLAGILA 240
  241 SIILASVGYL LGQVNVSQGA VCVLASQIAN FCESYIGATL QDKEGFEWLT NDVVNVLNIS 300
  301 TGGILAVLMQ QLLVSWRS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle