| Protein: | gi|115437280, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 768 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115437280, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
641.0 | [0..1] | [766..1] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MATIQDIGVS AAINILSAIT FLLAFAFLRL QPINDRVYFP KWYLKGARES PSHGGAFVRK 60
61 FVNLDMRSYL KVLSWMPAAL KMPEDELISH AGLDSAVYLR IYLIGLKIFA PITVLAFIIL 120
121 VPVNWTNITL QSSKVQHSDI DKLSISNIPV GSKRFAAHLT MAYVFTFWTC YVLLREYEIV 180
181 ATMRLRFL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [189-361] |
1 11 21 31 41 51
| | | | | |
1 ASEKRRPDQF TVLVRNIPPD PDESIGELVE HFFLVNHPDH YLTHQVVYNA NKLDKMVKEK 60
61 KKMQNWLDYY QLKYERNTSQ RPTTKTGFLG CFGSKVDAIE YYTSEIERIE KEETDERGKI 120
121 MKDPKSVVPA AFVSFRSRWG AAVCAQTQQT SNPTVWLTEW APEPRDVYWD NLS
|
| Detection Method: | |
| Confidence: | 1.22 |
| Match: | 1zh5A |
| Description: | Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [362-545] |
1 11 21 31 41 51
| | | | | |
1 IPFVYLTIRR LIIAVAFFFL NFFYVLPIAF VQSLANIEGI EKAAPFLKPL IEMRTIKSFI 60
61 QGFLPGIALK IFLILLPSIL MFMSKVEGLT SVSSLERRSA FKYYIFLFFN VFLGSIIAGS 120
121 ALEQLKTFLH QSANEIPRTI GEAIPMKATF FITYVMVDGW AGVAGEILRL KPLIIFHLKN 180
181 FFLV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [546-644] |
1 11 21 31 41 51
| | | | | |
1 KTEKDREEAM DPGSIGFDSN EPQIQLYFLL GLVYAVVTPF LLPFILIFFG LAYVVYRHQI 60
61 INVYNQEYES AAAFWPSVHG RIIVALIVSQ LLLLGLLST
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [645-768] |
1 11 21 31 41 51
| | | | | |
1 KGAGQSTPVL LVLPVVTFYF YKYCKNRYEP AFVEYPLQDA MRKDTLERAR EPGFDLKGYL 60
61 MNAYIHPVFK GDEDDEKFSI SDEPEAEQVL VATKRQSRRN TPVPSKYNGS ESPSLAEIVN 120
121 DQRL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
