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View Structure Prediction Details

Protein: TPK1_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 264 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPK1_ORYSJ.

Description E-value Query
Range
Subject
Range
TPK2_ORYSJ - Thiamine pyrophosphokinase 2 OS=Oryza sativa subsp. japonica GN=TPK2 PE=2 SV=1
275.0 [0..3] [264..9]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLPTMTHSS SFLRLPATSS PHPPPADDAS AAYAVVVLNQ RLPRFAPLLW DRARLRVCAD  60
   61 GGANRVFDGM PELLPAEDPD QVRMRYKPDV IKGDMDSIRP EVKEYYSNLG AEIVDESHDQ 120
  121 DTTDLHKCVS FITRNPPGSE ESNLYILVLG ALGGRFDHEM GNINVLYRFS NIRIVLLSDD 180
  181 CSIFLLPKTH SHEIHIERSI EGPHCGLIPM GSPSASTTTT GLRWNLDNTS MSYGGLISTS 240
  241 NIVEEETVRI TSDSDLIWTI SLRN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.09691
Match: 1ig3A
Description: Thiamin pyrophosphokinase, substrate-binding domain; Thiamin pyrophosphokinase, catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle