Protein: | SLA1 |
Organism: | Saccharomyces cerevisiae |
Length: | 1244 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLA1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1244] | [1..1244] |
|
3.0E-96 | [3..559] | [2..563] |
|
3.0E-95 | [3..559] | [2..563] |
|
3.0E-78 | [51..462] | [874..1223] |
|
1.0E-75 | [128..502] | [140..519] |
|
4.0E-75 | [57..462] | [834..1184] |
Region A: Residues: [1-73] |
1 11 21 31 41 51 | | | | | | 1 MTVFLGIYRA VYAYEPQTPE ELAIQEDDLL YLLQKSDIDD WWTVKKRVIG SDSEEPVGLV 60 61 PSTYIEEAPV LKK |
Detection Method: | ![]() |
Confidence: | 11.86 |
Match: | 1gbqA |
Description: | Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
cytoskeletal protein binding | 4.67602289179099 | bayes_pls_golite062009 |
actin binding | 4.45930345274274 | bayes_pls_golite062009 |
actin filament binding | 3.61541643295162 | bayes_pls_golite062009 |
binding | 2.92117841029443 | bayes_pls_golite062009 |
protein binding | 2.10925438883926 | bayes_pls_golite062009 |
Region A: Residues: [74-167] |
1 11 21 31 41 51 | | | | | | 1 VRAIYDYEQV QNADEELTFH ENDVFDVFDD KDADWLLVKS TVSNEFGFIP GNYVEPENGS 60 61 TSKQEQAPAA AEAPAATPAA APASAAVLPT NFLP |
Detection Method: | ![]() |
Confidence: | 50.69897 |
Match: | 1azeA_ |
Description: | Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [168-339] |
1 11 21 31 41 51 | | | | | | 1 PPQHNDRARM MQSKEDQAPD EDEEGPPPAM PARPTATTET TDATAAAVRS RTRLSYSDND 60 61 NDDEEDDYYY NSNSNNVGNH EYNTEYHSWN VTEIEGRKKK KAKLSIGNNK INFIPQKGTP 120 121 HEWSIDKLVS YDNEKKHMFL EFVDPYRSLE LHTGNTTTCE EIMNIIGEYK GA |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Term | Confidence | Notes |
cytoskeletal protein binding | 4.67602289179099 | bayes_pls_golite062009 |
actin binding | 4.45930345274274 | bayes_pls_golite062009 |
actin filament binding | 3.61541643295162 | bayes_pls_golite062009 |
binding | 2.97936662084105 | bayes_pls_golite062009 |
protein binding | 2.16879701585602 | bayes_pls_golite062009 |
signal transducer activity | 0.485790902947642 | bayes_pls_golite062009 |
molecular transducer activity | 0.485790902947642 | bayes_pls_golite062009 |
protein binding, bridging | 0.230308623372106 | bayes_pls_golite062009 |
molecular adaptor activity | 0.211510977251932 | bayes_pls_golite062009 |
Region A: Residues: [340-415] |
1 11 21 31 41 51 | | | | | | 1 SRDPGLREVE MASKSKKRGI VQYDFMAESQ DELTIKSGDK VYILDDKKSK DWWMCQLVDS 60 61 GKSGLVPAQF IEPVRD |
Detection Method: | ![]() |
Confidence: | 112.9897 |
Match: | 1g83A_ |
Description: | Fyn proto-oncogene tyrosine kinase, SH3 domain; Tyrosine kinase Fyn |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [416-502] |
1 11 21 31 41 51 | | | | | | 1 KKHTESTASG IIKSIKKNFT KSPSRSRSRS RSKSNANASW KDDELQNDVV GSAAGKRSRK 60 61 SSLSSHKKNS SATKDFPNPK KSRLWVD |
Detection Method: | ![]() |
Confidence: | 112.9897 |
Match: | 1g83A_ |
Description: | Fyn proto-oncogene tyrosine kinase, SH3 domain; Tyrosine kinase Fyn |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [503-791] |
1 11 21 31 41 51 | | | | | | 1 RSGTFKVDAE FIGCAKGKIH LHKANGVKIA VAADKLSNED LAYVEKITGF SLEKFKANDG 60 61 SSSRGTDSRD SERERRRRLK EQEEKERDRR LKERELYELK KARELLDEER SRLQEKELPP 120 121 IKPPRPTSTT SVPNTTSVPP AESSNNNNSS NKYDWFEFFL NCGVDVSNCQ RYTINFDREQ 180 181 LTEDMMPDIN NSMLRTLGLR EGDIVRVMKH LDKKFGRENI ASIPTNATGN MFSQPDGSLN 240 241 VATSPETSLP QQLLPQTTSP AQTAPSTSAE TDDAWTVKPA SKSESNLLS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [792-1063] |
1 11 21 31 41 51 | | | | | | 1 KKSEFTGSMQ DLLDLQPLEP KKAAASTPEP NLKDLEPVKT GGTTVPAAPV SSAPVSSAPA 60 61 PLDPFKTGGN NILPLSTGFV MMPMITGGDM LPMQRTGGFV VPQTTFGMQS QVTGGILPVQ 120 121 KTGNGLIPIS NTGGAMMPQT TFGAAATVLP LQKTGGGLIP IATTGGAQFP QTSFNVQGQQ 180 181 QLPTGSILPV QKTANGLISA NTGVSMPTVQ RTGGTMIPQT SFGVSQQLTG GAMMTQPQNT 240 241 GSAMMPQTSF NAVPQITGGA MMPQTSFNAL PQ |
Detection Method: | ![]() |
Confidence: | 9.96 |
Match: | 1jv2B |
Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [1064-1121] |
1 11 21 31 41 51 | | | | | | 1 VTGGAMMPLQ RTGGALNTFN TGGAMIPQTS FSSQAQNTGG FRPQSQFGLT LQKTGGIA |
Detection Method: | ![]() |
Confidence: | 9.96 |
Match: | 1jv2B |
Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [1122-1244] |
1 11 21 31 41 51 | | | | | | 1 PLNQNQFTGG AMNTLSTGGV LQQQQPQTMN TFNTGGVMQE LQMMTTFNTG GAMQQPQMMN 60 61 TFNTDGIMQQ PQMMNTFNTG GAMQQPQQQA LQNQPTGFGF GNGPQQSRQA NIFNATASNP 120 121 FGF |
Detection Method: | ![]() |
Confidence: | 14.72 |
Match: | 1ldvA |
Description: | No description for 1ldvA was found. |