| Protein: | APD1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 316 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APD1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..316] | [1..316] |
|
|
4.0E-72 | [26..299] | [30..267] |
|
|
8.0E-62 | [53..316] | [10..257] |
|
|
7.0E-61 | [66..300] | [2..211] |
|
Region A: Residues: [1-241] |
1 11 21 31 41 51
| | | | | |
1 MAFLNIFKQK RGDEASQLSA KGREEISQSI KICKSDDAAN EHSCSGDCKT EIEEGEQAFA 60
61 KLKIEHETPL LNSSKTPKIH FVVPTSQIDW QHDACLEDPK SVQYKISQWC DKNSAKFSNV 120
121 GTGKTLNCAV SSLPKDIMDI DVMRGTKNNV LILPYFIWLN DLRSDDVEAT LDGLVPDLLD 180
181 ENISREKLLE TRPNVAVARE RAFVFICSHT TRDKRCGITA PYLKKVFDSK LQEHGLYRDN 240
241 S
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [242-316] |
1 11 21 31 41 51
| | | | | |
1 DYRAEGVKIA FVNHVGGHKF AANVQIYLRN PNTLIWLGRV TPTIVPSIVE HLIVPEEPTL 60
61 PFPEKVRCIK KYQSW
|
| Detection Method: | |
| Confidence: | 3.0 |
| Match: | 1f37A_ |
| Description: | Thioredoxin-like 2Fe-2S ferredoxin |
Matching Structure (courtesy of the PDB): |
|
