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View Structure Prediction Details

Protein: YBR178W
Organism: Saccharomyces cerevisiae
Length: 124 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YBR178W.

Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPFSPTICE TVPLYPQWNG LIAGHLETSD ISETFMSFVF YATTINVIIE LKKLLILIIN  60
   61 GGNTRGAITS RDIRYLTPFK ICTCARFKKK KGSRNRNEIA HFSFRFRRFC KSLSRYTRVL 120
  121 LMFM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.783 a.24.14 FAT domain of focal adhesion kinase
View Download 0.664 a.24.11 Bacterial GAP domain
View Download 0.656 a.7.1 Spectrin repeat
View Download 0.653 a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.652 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle