YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YBR284W
Organism: Saccharomyces cerevisiae
Length: 797 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR284W.

Description E-value Query
Range
Subject
Range
YBR284W - Putative protein of unknown function; YBR284W is not an essential gene; null mutant exhibits decreas...
YB9Z_YEAST - Inactive deaminase YBR284W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR284W PE=3 ...
0.0 [1..797] [1..797]
AMPD2 - adenosine monophosphate deaminase 2 (isoform L)
0.0 [137..795] [242..854]
AMPD2_MOUSE - AMP deaminase 2 OS=Mus musculus GN=Ampd2 PE=1 SV=1
0.0 [137..795] [162..774]
AMPD1_RAT - AMP deaminase 1 OS=Rattus norvegicus GN=Ampd1 PE=1 SV=1
0.0 [132..795] [133..739]

Back

Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQNNESVFF VECDSYKESP STSPIRLDDL DGNDAVSDQG LAFDGDVGIT SQARVRNPRA  60
   61 QIFEDSNTDV VLHLDDLDMV PLNTKFDMQM EMGSPMAMPA ETPPPVEPLK TKDLAYSSLA 120
  121 HLPSYFFEQT HFRIDRKCLL EMSKLRRNYL TISKQDALSC PQLHSRVAGG YLKPVKEKLF 180
  181 GIRHFLDLEE SNTVNLLQDG NYMTELFNSQ INI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.216 b.60.1 Lipocalins

Predicted Domain #2
Region A:
Residues: [214-797]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTFKEFREDF EWCLKIIRDR SLSRFSEKRL QYLVNKFPVF QHLHSKEEMR QSKKVPHKDF  60
   61 YNCRKIDLNL LLSGCFSQWQ LTEFIWTKLR KEPDRVIHQA FNGSHITLSQ LFKVNFEETG 120
  121 QFFNGLKIID DSFLEWYKVI YLAKYHLVND EMEIHTGSHG KQLRYYLIAK TFLEFDNYIN 180
  181 GEYLAELLKT FLIKPQEESK YQLCQLSVDF QFYLHYDNSD VDNWWMVFAN WLNHYNIFSN 240
  241 NIRWNIRISR IYPELYHTGK VKNFQEYLNL IFKPLFNAEN YLHKSLGPIL LKFLSQVSSI 300
  301 DLCIQDTDNY IWKNFTAVSC LPKDWTSGGD NPTISQYMYY VYVNLTKLNH IRQALHQNTF 360
  361 TLRSSCSPTS MNRTSQFSNT LNFTEHTEAI LNNFLLACGG FLNAENLWNA PPSLVYLFYL 420
  421 SQIPMVVAPL NSIVDSKPTM LQEQAPTGLV LEPSKPYKKN PFMKFFEMGF KISLSSESIL 480
  481 YNNSYTKEPI IEEYSVAASI YRLHSADLCE LLRNSVITSG FSSTLKNKWL GVSLASHDYF 540
  541 VENTGFVDKW YDCKPNTSLE HNVPIIRRQY RSSTLAGEWR LIIA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 12.161151
Match: PF00962
Description: Adenosine/AMP deaminase

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted functions:

Term Confidence Notes
catalytic activity 0.935564737557247 bayes_pls_golite062009
hydrolase activity 0.928922745938392 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle