YRC Public Data Repository - Protein Structure Prediction

Protein:	YBR285W
Organism:	Saccharomyces cerevisiae
Length:	144 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR285W.

Description	E-value	Query Range	Subject Range
YB8A_YEAST - Putative uncharacterized protein YBR285W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN... YBR285W - Putative protein of unknown function; YBR285W is not an essential gene and deletion of YBR285W leads... gi\|190408566 - gi\|190408566\|gb\|EDV11831.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi\|151946670 - gi\|151946670\|gb\|EDN64892.1\| conserved protein [Saccharomyces cerevisiae YJM789]	277.0	[0..1]	[144..1]

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Predicted Domain #1

Region A:
Residues: [1-144]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIFSRFSYF DSLFSFKKQE PSPIEIIYCN ENNGFINIKS LESPTDDSME ADISHREMAT  60
   61 ILTRNRNNLG KVAIDKKGVN NHCIDLNELK KGLVANEHKL DNDNSTRHQN TYSPEDSVEF 120
  121 DRFDDKQSRI LKCSTRRSYL RYKK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits