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View Structure Prediction Details

Protein: FUS1
Organism: Saccharomyces cerevisiae
Length: 512 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FUS1.

Description E-value Query
Range
Subject
Range
FUS1_YEAST - Nuclear fusion protein FUS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FUS1 PE=1 SV...
gi|151943802 - gi|151943802|gb|EDN62102.1| cell fusion-related protein [Saccharomyces cerevisiae YJM789]
gi|207347373 - gi|207347373|gb|EDZ73567.1| YCL027Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190406419 - gi|190406419|gb|EDV09686.1| nuclear fusion protein FUS1 [Saccharomyces cerevisiae RM11-1a]
FUS1 - Membrane protein localized to the shmoo tip, required for cell fusion; expression regulated by matin...
0.0 [1..512] [1..512]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [1..512] [1..512]

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Predicted Domain #1
Region A:
Residues: [1-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVATIMQTTT TVLTTVAAMS TTLASNYISS QASSSTSVTT VTTIATSIRS TPSNLLFSNV  60
   61 AAQPKSSSAS TIGLSIGLPI GIFCFGLLIL LCYFYLKRNS VSISNPPMSA TIPREEEYCR 120
  121 RTNWFSRLFW QSKCEDQNSY SNRDIEKYND TQWTSGDNMS SKIQYKISKP IIPQHILTPK 180
  181 KTVKNPYAWS GKNISLDPKV NEMEEEKVVD AFLYTKPPNI VHIESSMPSY NDLPSQKTVS 240
  241 SKKTALKTSE KWSYESPLSR WFLRGSTYFK DYGLSKTSLK TPTGAPQLKQ MKMLSRISKG 300
  301 YFNESDIMPD ERSPILEYNN TPLDANDSVN NLGNTTPDSQ ITSYRNNNID LITARPHSVI 360
  361 YGTTAQQTLE TNFNDHHDCN KSTEKHELII PTPSKPLKKR KKRRQSKMYQ HLQHLSRSKP 420
  421 LPLTPNSKYN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [431-512]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEASVQLGKT YTVIQDYEPR LTDEIRISLG EKVKILATHT DGWCLVEKCN TQKGSIHVSV  60
   61 DDKRYLNEDR GIVPGDCLQE YD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.638272
Match: PF00018
Description: SH3 domain

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle