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View Structure Prediction Details

Protein: YCL056C
Organism: Saccharomyces cerevisiae
Length: 144 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YCL056C.

Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSKKNTAEI SAKDIWENIW SGVSSLLDFF AVLENLGVVN DKLYVSGLLR KVWLCYSCIS  60
   61 VIKCVWKLIK LCKVKFKIDQ RLDGEGNGLV KDKLINFKKK YNEHIRHITA ALLQDLSYLM 120
  121 VLIYPGTRLF KRLSNIITLC RIIV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.911 a.25.1 Ferritin-like
View Download 0.901 a.47.2 t-snare proteins
View Download 0.901 a.47.2 t-snare proteins
View Download 0.893 a.47.2 t-snare proteins
View Download 0.893 a.47.2 t-snare proteins
View Download 0.812 a.7.5 Tubulin chaperone cofactor A
View Download 0.812 a.7.5 Tubulin chaperone cofactor A
View Download 0.789 a.25.1 Ferritin-like
View Download 0.729 a.7.1 Spectrin repeat
View Download 0.647 a.24.9 alpha-catenin/vinculin
View Download 0.355 a.168.1 GEF domain of SopE toxin
View Download 0.313 a.1.1 Globin-like
View Download 0.219 a.25.1 Ferritin-like
View Download 0.213 d.67.3 Ribosome recycling factor, RRF


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle