YRC Public Data Repository - Protein Structure Prediction

Protein:	YDL023C
Organism:	Saccharomyces cerevisiae
Length:	106 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDL023C.

Description	E-value	Query Range	Subject Range
gi\|984183 - gi\|984183\|emb\|CAA62527.1\| unnamed protein product [Saccharomyces cerevisiae]	120.0	[0..1]	[66..40]
gi\|50304841, gi\|... - gi\|50304841\|ref\|XP_452376.1\| unnamed protein product [Kluyveromyces lactis], gi\|49641509\|emb\|CAH0122...	72.0	[0..1]	[56..1]

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Predicted Domain #1

Region A:
Residues: [1-106]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISVNFSPLI SSSNTHICTI GAKTSGYPLQ FSATTLAIVV PQLPDPITVT LKGFSAAFKE  60
   61 TEEELLFLPA FKWPEVKFNL SAAADIFILS IFVFVEGGGV QYTIVS

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Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.245	d.110.4	SNARE-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits