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View Structure Prediction Details

Protein: HBT1
Organism: Saccharomyces cerevisiae
Length: 1046 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HBT1.

Description E-value Query
Range
Subject
Range
HBT1_YEAST - Protein HBT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HBT1 PE=1 SV=1
HBT1 - Substrate of the Hub1p ubiquitin-like protein that localizes to the shmoo tip (mating projection); m...
0.0 [1..1046] [1..1046]
PVDB_PLAKN - Duffy receptor beta form OS=Plasmodium knowlesi PE=3 SV=1
2.0E-69 [149..664] [528..1014]
gi|15828996 - gi|15828996|ref|NP_326356.1| lipoprotein VSAC (fragment) [Mycoplasma pulmonis UAB CTIP]
gi|14089939, gi|... - pir||E90577 lipoprotein vsaC [imported] - Mycoplasma pulmonis (strain UAB CTIP) (fragment), gi|14089...
8.0E-64 [2..583] [105..689]
TCNA_TRYCR - Sialidase OS=Trypanosoma cruzi GN=TCNA PE=2 SV=1
2.0E-54 [3..515] [598..1118]
gi|9695347 - gi|9695347|gb|AAF97432.1|U23947_9 VsaC1 [Mycoplasma pulmonis]
3.0E-49 [2..467] [44..520]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
3.0E-45 [1..551] [256..811]
SPBPJ4664.02 - glycoprotein
YHU2_SCHPO - Uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02 OS=Schizosaccharomyces pombe (str...
3.0E-45 [1..576] [1638..2218]

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Predicted Domain #1
Region A:
Residues: [1-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMNESISKD GQGEEEQNNF SFGGKPGSYD SNSDSAQRKK SFSTTKPTEY NLPKEQPEST  60
   61 SKNLETKAKN ILLPWRKKHN KDSETPHEDT EADANRRANV TSDVNPVSAD TKSSSGPNAT 120
  121 ITTHGYSYVK TTTPAATSEQ SKVKTSPPTS HEHSNIKASP TAHRHSKGDA GHPSIATTHN 180
  181 HSTSKAATSP VTHTHGHSSA TTSPVTHTHG HASVKTTSPT NTHEHSKANT GPSATATTHG 240
  241 HINVKTTHPV SHGHSGSSTG PKSTAAAQDH SSTKTNPSVT HGHTSVKDNS SATKGYSNTD 300
  301 SNSDRDVIPG SFRGMTGTDV NPVDPSVYTS TGPKSNVSSG MNAVDPSVYT DTSSKSADRR 360
  361 KYSGNTATGP PQDTIKEIAQ NVKMDESEQT GLKNDQVSGS DAIQQQTMEP EPKAAVGTSG 420
  421 FVSQQPSYHD SNKNIQHPEK NKVDNKNISE RAAEKFNIER DDILESADDY QQKNIKSKTD 480
  481 SNWGPIEYSS SAGKNKNLQD VVIPSSMKEK FDSGTSGSQN MPKAGTELGH MKYNDNGRDN 540
  541 LQYVAGSQAG SQNTNN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [557-1046]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NIDMSPRHEA EWSGLSNDAT TRNNVVSPAM KDEDMNEDST KPHQYGLDYL DDVEDYHEND  60
   61 IDDYSNAKKN DLYSKKAYQG KPSDYNYEQR EKIPGTFEPD TLSKSVQKQD EDPLSPRQTT 120
  121 NRAGMETARD ESLGNYEYSN TSGNKKLSDL SKNKSGPTPT RSNFIDQIEP RRAKTTQDIA 180
  181 SDAKDFTNNP ETGTTGNVDT TGRMGAKSKT FSSNPFDDSK NTDTHLENAN VAAFDNSRSG 240
  241 DTTYSKSGDA ETAAYDNIKN ADPTYAKSQD ITGMTHDQEP SSEQKASYGS GGNSQNQEYS 300
  301 SDDNIDVNKN AKVLEEDAPG YKREVDLKNK RRTDLGGADA SNAYAAEVGN FPSLIDPHVP 360
  361 TYGFKDTNTS SSQKPSEGTY PETTSYSIHN ETTSQGRKVS VGSMGSGKSK HHHNHHRHSR 420
  421 QNSSKGSDYD YNNSTHSAEH TPRHHQYGSD EGEQDYHDDE QGEEQAGKQS FMGRVRKSIS 480
  481 GGTFGFRSEI 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [396-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVSGSDAIQQ QTMEPEPKAA VGTSGFVSQQ PSYHDSNKNI QHPEKNKVDN KNISERAAEK  60
   61 FNIERDDILE SADDYQQKNI KSKTDSNWGP IEYSSSAGKN KNLQDVVIPS SMKEKFDSGT 120
  121 SGSQNMPKAG TELGHMKYND NGRDNLQYVA GSQAGSQNTN NNIDMSPRHE AEWS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [570-771]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLSNDATTRN NVVSPAMKDE DMNEDSTKPH QYGLDYLDDV EDYHENDIDD YSNAKKNDLY  60
   61 SKKAYQGKPS DYNYEQREKI PGTFEPDTLS KSVQKQDEDP LSPRQTTNRA GMETARDESL 120
  121 GNYEYSNTSG NKKLSDLSKN KSGPTPTRSN FIDQIEPRRA KTTQDIASDA KDFTNNPETG 180
  181 TTGNVDTTGR MGAKSKTFSS NP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [772-1046]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FDDSKNTDTH LENANVAAFD NSRSGDTTYS KSGDAETAAY DNIKNADPTY AKSQDITGMT  60
   61 HDQEPSSEQK ASYGSGGNSQ NQEYSSDDNI DVNKNAKVLE EDAPGYKREV DLKNKRRTDL 120
  121 GGADASNAYA AEVGNFPSLI DPHVPTYGFK DTNTSSSQKP SEGTYPETTS YSIHNETTSQ 180
  181 GRKVSVGSMG SGKSKHHHNH HRHSRQNSSK GSDYDYNNST HSAEHTPRHH QYGSDEGEQD 240
  241 YHDDEQGEEQ AGKQSFMGRV RKSISGGTFG FRSEI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle