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View Structure Prediction Details

Protein: IRC2
Organism: Saccharomyces cerevisiae
Length: 102 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for IRC2.

Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFALIISSKG KTSGFFFNSS FSSSALVGIA PLTAYSALVT PVFKSFLVIL PAGLKSKSFA  60
   61 VNTPFKSCWC VIVMCSYFFC VYHLQKQHYC GAPSLYSYLL CL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.840 a.47.2 t-snare proteins
View Download 0.764 a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.735 f.17.1 F1F0 ATP synthase subunit C
View Download 0.723 a.24.9 alpha-catenin/vinculin
View Download 0.723 d.58.51 Description not found.
View Download 0.690 a.2.6 Effector domain of the protein kinase pkn/prk1
View Download 0.667 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.649 f.18.1 F1F0 ATP synthase subunit A
View Download 0.605 a.7.1 Spectrin repeat


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle