Protein: | GAL83 |
Organism: | Saccharomyces cerevisiae |
Length: | 417 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAL83.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..417] | [1..417] |
|
3.0E-92 | [9..417] | [24..486] |
|
2.0E-67 | [124..380] | [105..375] |
|
1.0E-63 | [126..380] | [107..376] |
|
4.0E-63 | [136..380] | [15..253] |
|
1.0E-62 | [145..380] | [21..251] |
|
6.0E-62 | [114..377] | [108..360] |
|
1.0E-61 | [126..380] | [113..382] |
Region A: Residues: [1-130] |
1 11 21 31 41 51 | | | | | | 1 MAGDNPENKD ASMLDVSDAA SNTTINGKHS ADSTNEASLA YTFSQMNVDN PNELEPQHPL 60 61 RHKSSLIFND DDDDEIPPYS NHAENGSGET FDSDDDIDAS SSSSIDSNEG DIHDADMTGN 120 121 TLQKMDYQPS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [131-225] |
1 11 21 31 41 51 | | | | | | 1 QQPDSLQNQG FQQQQEQQQG TVEGKKGRAM MFPVDITWQQ GGNKVYVTGS FTGWRKMIGL 60 61 VPVPGQPGLM HVKLQLPPGT HRFRFIVDNE LRFSD |
Detection Method: | |
Confidence: | 27.69897 |
Match: | 1eh9A_ |
Description: | Glycosyltrehalose trehalohydrolase, N-terminal domain N; Glycosyltrehalose trehalohydrolase; Glycosyltrehalose trehalohydrolase, central domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
AMP-activated protein kinase activity | 4.78975226545815 | bayes_pls_golite062009 |
binding | 2.65544526722793 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 1.69105818607475 | bayes_pls_golite062009 |
phosphotransferase activity, alcohol group as acceptor | 1.66390525860632 | bayes_pls_golite062009 |
kinase activity | 1.64560031716993 | bayes_pls_golite062009 |
voltage-gated potassium channel activity | 1.62236890256061 | bayes_pls_golite062009 |
transferase activity, transferring phosphorus-containing groups | 1.53194692728729 | bayes_pls_golite062009 |
protein binding | 1.50286160643298 | bayes_pls_golite062009 |
protein kinase activity | 1.44964326848891 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 1.39709424453076 | bayes_pls_golite062009 |
transferase activity | 1.26709925711174 | bayes_pls_golite062009 |
cation channel activity | 1.10928620793874 | bayes_pls_golite062009 |
ligand-gated ion channel activity | 1.08920948133636 | bayes_pls_golite062009 |
ligand-gated channel activity | 1.08920948133636 | bayes_pls_golite062009 |
gated channel activity | 0.9831902560942 | bayes_pls_golite062009 |
ion channel activity | 0.88499192552319 | bayes_pls_golite062009 |
protein serine/threonine kinase activity | 0.726369450752205 | bayes_pls_golite062009 |
cytoskeletal protein binding | 0.60798225319459 | bayes_pls_golite062009 |
actin binding | 0.54002000529721 | bayes_pls_golite062009 |
enzyme binding | 0.37496592438035 | bayes_pls_golite062009 |
Region A: Residues: [226-417] |
1 11 21 31 41 51 | | | | | | 1 YLPTATDQMG NFVNYMEVSA PPDWGNEPQQ HLAEKKANHV DDSKLSKRPM SARSRIALEI 60 61 EKEPDDMGDG YTRFHDETPA KPNLEYTQDI PAVFTDPNVM EQYYLTLDQQ QNNHQNMAWL 120 121 TPPQLPPHLE NVILNSYSNA QTDNTSGALP IPNHVILNHL ATSSIKHNTL CVASIVRYKQ 180 181 KYVTQILYTP LQ |
Detection Method: | |
Confidence: | 27.69897 |
Match: | 1eh9A_ |
Description: | Glycosyltrehalose trehalohydrolase, N-terminal domain N; Glycosyltrehalose trehalohydrolase; Glycosyltrehalose trehalohydrolase, central domain |
Matching Structure (courtesy of the PDB): |