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View Structure Prediction Details

Protein: YHR130C
Organism: Saccharomyces cerevisiae
Length: 111 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YHR130C.

Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKSIYIIIG YMLHDEEFFY FFFISFYTLW IVFFLLHLSF FSTLSFGIFH DFDTDVYIKV  60
   61 GNYILHFLEL SKNSNLLKNS SEMLKHFRLA SLMYMYVYTQ MICPSLLGIR N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.847 a.24.9 alpha-catenin/vinculin
View Download 0.832 a.216.1 Description not found.
View Download 0.714 a.29.16 Description not found.
View Download 0.711 a.7.1 Spectrin repeat
View Download 0.711 a.7.1 Spectrin repeat
View Download 0.649 a.47.2 t-snare proteins
View Download 0.649 a.47.2 t-snare proteins
View Download 0.639 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.635 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.594 a.4.5 "Winged helix" DNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle