| Protein: | DSE2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 325 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DSE2.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-58 | [1..325] | [1..325] |
|
|
2.0E-11 | [75..281] | [1069..1288] |
|
|
5.0E-9 | [86..318] | [970..1221] |
|
|
1.0E-6 | [49..262] | [1430..1656] |
|
|
5.0E-5 | [47..211] | [523..708] |
|
|
5.0E-5 | [66..232] | [81..245] |
|
Region A: Residues: [1-208] |
1 11 21 31 41 51
| | | | | |
1 MKFNFSTIFN ILFFLFTLIE ANSNGETVKL ITSDGIVYSY AVYTKTLAPA RVVVKTISYT 60
61 TTRVYPITLA NSVVSSTTEK ITEVSTVSAS EQVSATQTNS LVSTSTVSTI SPTISSGSST 120
121 SSSSTYDIES SQSIESSGTS SATAEPSASS GFRLTSSSAF VSSTAPFSSQ LSSSSSSETS 180
181 SSSFSTSSSS APLSLTSSSS SSSSFATI
|
| Detection Method: |  |
| Confidence: | 3.39794 |
| Match: | 1acc__ |
| Description: | Anthrax protective antigen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [209-325] |
1 11 21 31 41 51
| | | | | |
1 ITLAPSSSKS GNSQLTLASS SSTSAVESSQ TGSTIARTTS TLVPSSSVDT TSRATTSMPL 60
61 ESSSTQSISV SSSDGTCYVF YDDDDYYSTV YLTNPSQSVD AATTITSTNT IYATVTI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.532 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.661 | b.60.1 | Lipocalins |
| View | Download | 0.632 | d.131.1 | DNA clamp |
| View | Download | 0.523 | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.657 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.509 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.507 | b.60.1 | Lipocalins |
| View | Download | 0.486 | b.76.2 | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain |
| View | Download | 0.482 | b.60.1 | Lipocalins |
| View | Download | 0.472 | b.60.1 | Lipocalins |
| View | Download | 0.426 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.401 | d.24.1 | Pili subunits |
| View | Download | 0.401 | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.388 | b.59.1 | XRCC4, N-terminal domain |
| View | Download | 0.382 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.382 | d.110.4 | SNARE-like |
| View | Download | 0.382 | b.60.1 | Lipocalins |
| View | Download | 0.380 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.368 | b.55.1 | PH domain-like |
| View | Download | 0.353 | b.1.1 | Immunoglobulin |
| View | Download | 0.342 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.328 | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.316 | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
| View | Download | 0.300 | b.55.1 | PH domain-like |
| View | Download | 0.297 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.283 | b.1.1 | Immunoglobulin |
| View | Download | 0.281 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.255 | b.88.1 | Mss4-like |
| View | Download | 0.249 | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.244 | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.244 | b.7.3 | PHL pollen allergen |
| View | Download | 0.237 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.231 | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.230 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.228 | d.95.2 | Homing endonucleases |
| View | Download | 0.228 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.218 | d.26.3 | Chitinase insertion domain |
| View | Download | 0.216 | b.60.1 | Lipocalins |
| View | Download | 0.212 | d.218.1 | Nucleotidyltransferase |
| View | Download | 0.208 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.201 | b.60.1 | Lipocalins |
